Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 CLUHP2-201ENST00000426660 1303 ntBASIC13.21□□□□□ -0.29
LRRC46Q96FV0 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 AC104457.1-201ENST00000401024 814 ntBASIC13.21□□□□□ -0.29
LRRC46Q96FV0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 CHMP1AP1-201ENST00000445563 662 ntBASIC13.21□□□□□ -0.29
LRRC46Q96FV0 RN7SL11P-201ENST00000471305 293 ntBASIC13.21□□□□□ -0.29
LRRC46Q96FV0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 HIST2H2BC-201ENST00000498492 580 ntBASIC13.21□□□□□ -0.29
LRRC46Q96FV0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 AC013355.1-201ENST00000562625 723 ntBASIC13.21□□□□□ -0.29
LRRC46Q96FV0 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 AC091812.3-201ENST00000621362 345 ntBASIC13.21□□□□□ -0.29
LRRC46Q96FV0 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 AC002472.3-201ENST00000640124 621 ntBASIC13.21□□□□□ -0.29
LRRC46Q96FV0 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
LRRC46Q96FV0 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
LRRC46Q96FV0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRC46Q96FV0 AC012508.2-201ENST00000567613 1472 ntBASIC13.21□□□□□ -0.3
LRRC46Q96FV0 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRC46Q96FV0 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.21□□□□□ -0.3
LRRC46Q96FV0 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LRRC46Q96FV0 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRC46Q96FV0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRC46Q96FV0 AP000593.2-201ENST00000542775 1433 ntBASIC13.21□□□□□ -0.3
LRRC46Q96FV0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRRC46Q96FV0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LRRC46Q96FV0 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
LRRC46Q96FV0 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.21□□□□□ -0.3
LRRC46Q96FV0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.21□□□□□ -0.3
LRRC46Q96FV0 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms