Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RPGRQ92834 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPGRQ92834 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPGRQ92834 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPGRQ92834 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.67■□□□□ 0.42
RPGRQ92834 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPGRQ92834 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPGRQ92834 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPGRQ92834 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RPGRQ92834 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPGRQ92834 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPGRQ92834 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RPGRQ92834 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RPGRQ92834 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.67■□□□□ 0.42
RPGRQ92834 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPGRQ92834 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPGRQ92834 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPGRQ92834 BX679664.3-201ENST00000414070 555 ntBASIC17.67■□□□□ 0.42
RPGRQ92834 KRT17P4-201ENST00000429445 819 ntBASIC17.67■□□□□ 0.42
RPGRQ92834 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC17.67■□□□□ 0.42
RPGRQ92834 AC113935.1-201ENST00000471722 555 ntBASIC17.67■□□□□ 0.42
RPGRQ92834 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC17.67■□□□□ 0.42
RPGRQ92834 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RPGRQ92834 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RPGRQ92834 KLF17P1-201ENST00000547105 1126 ntBASIC17.67■□□□□ 0.42
RPGRQ92834 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC17.67■□□□□ 0.42
RPGRQ92834 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.67■□□□□ 0.42
RPGRQ92834 RN7SL596P-201ENST00000582123 288 ntBASIC17.67■□□□□ 0.42
RPGRQ92834 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC17.67■□□□□ 0.42
RPGRQ92834 AP005264.5-201ENST00000590066 467 ntBASIC17.67■□□□□ 0.42
RPGRQ92834 HELLS-212ENST00000630929 400 ntTSL 5 BASIC17.67■□□□□ 0.42
RPGRQ92834 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RPGRQ92834 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.67■□□□□ 0.42
RPGRQ92834 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RPGRQ92834 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RPGRQ92834 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC17.67■□□□□ 0.42
RPGRQ92834 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RPGRQ92834 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.67■□□□□ 0.42
RPGRQ92834 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC17.67■□□□□ 0.42
RPGRQ92834 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RPGRQ92834 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.66■□□□□ 0.42
RPGRQ92834 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 AC063926.3-201ENST00000624734 5658 ntBASIC17.66■□□□□ 0.42
RPGRQ92834 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.66■□□□□ 0.42
RPGRQ92834 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.66■□□□□ 0.42
RPGRQ92834 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.66■□□□□ 0.42
RPGRQ92834 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC17.66■□□□□ 0.42
RPGRQ92834 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC17.66■□□□□ 0.42
RPGRQ92834 AC005740.1-201ENST00000515639 522 ntBASIC17.66■□□□□ 0.42
RPGRQ92834 FAM86B3P-203ENST00000523992 854 ntBASIC17.66■□□□□ 0.42
RPGRQ92834 NAA40-205ENST00000539656 577 ntTSL 4 BASIC17.66■□□□□ 0.42
RPGRQ92834 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC17.66■□□□□ 0.42
RPGRQ92834 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 AL359091.4-201ENST00000610052 409 ntBASIC17.66■□□□□ 0.42
RPGRQ92834 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC17.66■□□□□ 0.42
RPGRQ92834 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RPGRQ92834 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RPGRQ92834 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
RPGRQ92834 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.66■□□□□ 0.42
RPGRQ92834 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
RPGRQ92834 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RPGRQ92834 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RPGRQ92834 AC215219.1-201ENST00000400706 1817 ntBASIC17.65■□□□□ 0.42
RPGRQ92834 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.65■□□□□ 0.42
RPGRQ92834 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 AC132872.4-202ENST00000622924 2756 ntBASIC17.65■□□□□ 0.42
RPGRQ92834 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC17.65■□□□□ 0.42
RPGRQ92834 RN7SL494P-201ENST00000461517 304 ntBASIC17.65■□□□□ 0.42
RPGRQ92834 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC17.65■□□□□ 0.42
RPGRQ92834 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC17.65■□□□□ 0.42
RPGRQ92834 SNORD3B-1-201ENST00000577988 758 ntBASIC17.65■□□□□ 0.42
RPGRQ92834 AP005264.6-204ENST00000588436 719 ntBASIC17.65■□□□□ 0.42
RPGRQ92834 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC17.65■□□□□ 0.42
RPGRQ92834 AC012073.1-201ENST00000606114 1108 ntBASIC17.65■□□□□ 0.42
RPGRQ92834 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RPGRQ92834 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms