Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
UBA3Q8TBC4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.37■□□□□ 0.05
UBA3Q8TBC4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
UBA3Q8TBC4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBA3Q8TBC4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
UBA3Q8TBC4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.37■□□□□ 0.05
UBA3Q8TBC4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 SBF1P1-201ENST00000444527 5631 ntBASIC15.36■□□□□ 0.05
UBA3Q8TBC4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 AC006033.1-201ENST00000440505 426 ntBASIC15.36■□□□□ 0.05
UBA3Q8TBC4 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 AC005740.2-201ENST00000511085 419 ntBASIC15.36■□□□□ 0.05
UBA3Q8TBC4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 SNORD3B-2-202ENST00000571722 791 ntBASIC15.36■□□□□ 0.05
UBA3Q8TBC4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UBA3Q8TBC4 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.35■□□□□ 0.05
UBA3Q8TBC4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 AC004898.1-201ENST00000451057 766 ntBASIC15.35■□□□□ 0.05
UBA3Q8TBC4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 AC003686.1-201ENST00000550956 1034 ntBASIC15.35■□□□□ 0.05
UBA3Q8TBC4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 AC124068.2-201ENST00000569473 1109 ntBASIC15.35■□□□□ 0.05
UBA3Q8TBC4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 GPR182-203ENST00000622922 591 ntBASIC15.35■□□□□ 0.05
UBA3Q8TBC4 AC092299.1-201ENST00000632679 757 ntBASIC15.35■□□□□ 0.05
UBA3Q8TBC4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UBA3Q8TBC4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.34■□□□□ 0.05
UBA3Q8TBC4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms