Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 AC104506.1-201ENST00000609247 429 ntBASIC13.61□□□□□ -0.23
NUP43Q8NFH3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 AL023775.1-201ENST00000454907 1746 ntBASIC13.61□□□□□ -0.23
NUP43Q8NFH3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 TUBB8P4-201ENST00000511806 1324 ntBASIC13.61□□□□□ -0.23
NUP43Q8NFH3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.61□□□□□ -0.23
NUP43Q8NFH3 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 TMBIM7P-202ENST00000641474 1516 ntBASIC13.6□□□□□ -0.23
NUP43Q8NFH3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 MIR6720-201ENST00000611664 98 ntBASIC13.6□□□□□ -0.23
NUP43Q8NFH3 MIR6775-201ENST00000617557 69 ntBASIC13.6□□□□□ -0.23
NUP43Q8NFH3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NUP43Q8NFH3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 AC090643.2-201ENST00000623442 2029 ntBASIC13.59□□□□□ -0.23
NUP43Q8NFH3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.59□□□□□ -0.23
NUP43Q8NFH3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.59□□□□□ -0.23
NUP43Q8NFH3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms