Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 MIR1202-201ENST00000408529 83 ntBASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 CD8B2-202ENST00000417670 633 ntBASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 KRT90P-201ENST00000549264 1064 ntBASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 AC073413.1-201ENST00000603927 732 ntBASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 AC006453.4-201ENST00000636949 1252 ntBASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 KRT8P4-201ENST00000509735 1454 ntBASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC00346Q8IVM7 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00346Q8IVM7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.9□□□□□ -0.35
LINC00346Q8IVM7 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
LINC00346Q8IVM7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
LINC00346Q8IVM7 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 LINC02486-201ENST00000604157 3000 ntBASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 AC079781.5-202ENST00000641784 3743 ntBASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 RN7SL713P-201ENST00000582127 302 ntBASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LINC00346Q8IVM7 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms