Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 MBP-230ENST00000528160 584 ntTSL 5 BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 AC016582.2-202ENST00000587765 1094 ntBASIC17.79■□□□□ 0.44
COL23A1Q86Y22 AL031673.1-201ENST00000611460 466 ntBASIC17.79■□□□□ 0.44
COL23A1Q86Y22 AC113385.2-201ENST00000614465 762 ntBASIC17.79■□□□□ 0.44
COL23A1Q86Y22 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 FAM226B-201ENST00000602508 1490 ntBASIC17.79■□□□□ 0.44
COL23A1Q86Y22 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 SARS-202ENST00000369923 1882 ntTSL 5 BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 HLF-202ENST00000430986 1385 ntTSL 2 BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COL23A1Q86Y22 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 AL773545.2-201ENST00000442149 472 ntBASIC17.78■□□□□ 0.44
COL23A1Q86Y22 KRT19P4-201ENST00000443208 943 ntBASIC17.78■□□□□ 0.44
COL23A1Q86Y22 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 GOLGA2P8-201ENST00000505201 779 ntBASIC17.78■□□□□ 0.44
COL23A1Q86Y22 AC011431.1-201ENST00000512971 230 ntBASIC17.78■□□□□ 0.44
COL23A1Q86Y22 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 AC104506.1-201ENST00000609247 429 ntBASIC17.78■□□□□ 0.44
COL23A1Q86Y22 AC048382.6-201ENST00000621980 1223 ntBASIC17.78■□□□□ 0.44
COL23A1Q86Y22 AC245369.7-201ENST00000631386 350 ntBASIC17.78■□□□□ 0.44
COL23A1Q86Y22 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COL23A1Q86Y22 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 RN7SL578P-201ENST00000477781 283 ntBASIC17.77■□□□□ 0.44
COL23A1Q86Y22 AC108724.1-201ENST00000481669 352 ntBASIC17.77■□□□□ 0.44
COL23A1Q86Y22 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 AC132825.4-202ENST00000578792 434 ntBASIC17.77■□□□□ 0.44
COL23A1Q86Y22 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 RN7SL524P-201ENST00000581152 300 ntBASIC17.77■□□□□ 0.44
COL23A1Q86Y22 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
COL23A1Q86Y22 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.77■□□□□ 0.43
COL23A1Q86Y22 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC17.77■□□□□ 0.43
COL23A1Q86Y22 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL23A1Q86Y22 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL23A1Q86Y22 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL23A1Q86Y22 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
COL23A1Q86Y22 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC17.77■□□□□ 0.43
COL23A1Q86Y22 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
COL23A1Q86Y22 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.77■□□□□ 0.43
COL23A1Q86Y22 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
COL23A1Q86Y22 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.76■□□□□ 0.43
COL23A1Q86Y22 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms