Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 AL731571.1-201ENST00000617058 5428 ntBASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 AC005014.1-201ENST00000432006 2976 ntBASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 AP000437.1-201ENST00000624057 2085 ntBASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 AL139094.1-201ENST00000405549 1188 ntBASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 AC055876.3-201ENST00000431496 288 ntBASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 AC027369.6-201ENST00000525520 931 ntBASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 AC044860.1-202ENST00000559481 777 ntBASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 AL355385.1-201ENST00000606123 409 ntBASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 AC138649.4-201ENST00000612222 287 ntBASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 SPDYE12P-201ENST00000618416 771 ntBASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 LINC02486-201ENST00000604157 3000 ntBASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 PCDHA6-201ENST00000378126 3267 ntBASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 NUS1P3-201ENST00000423502 862 ntBASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 AC241585.1-201ENST00000433527 519 ntBASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 AC093214.1-201ENST00000511688 1107 ntBASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 AC103988.2-201ENST00000561804 725 ntBASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.1□□□□□ -0.47
ANKRD55Q3KP44 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms