Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 AC006453.4-201ENST00000636949 1252 ntBASIC14.03□□□□□ -0.16
HMGCS1Q01581 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 TUBB8P4-201ENST00000511806 1324 ntBASIC14.03□□□□□ -0.16
HMGCS1Q01581 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 AL022313.4-201ENST00000562756 2046 ntBASIC14.03□□□□□ -0.16
HMGCS1Q01581 FAM90A12P-201ENST00000519497 2375 ntBASIC14.03□□□□□ -0.16
HMGCS1Q01581 FAM90A24P-201ENST00000520792 2369 ntBASIC14.03□□□□□ -0.16
HMGCS1Q01581 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HMGCS1Q01581 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HMGCS1Q01581 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HMGCS1Q01581 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HMGCS1Q01581 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.02□□□□□ -0.16
HMGCS1Q01581 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.02□□□□□ -0.16
HMGCS1Q01581 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.02□□□□□ -0.16
HMGCS1Q01581 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.02□□□□□ -0.16
HMGCS1Q01581 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
HMGCS1Q01581 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.02□□□□□ -0.16
HMGCS1Q01581 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.02□□□□□ -0.16
HMGCS1Q01581 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
HMGCS1Q01581 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGCS1Q01581 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HMGCS1Q01581 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGCS1Q01581 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HMGCS1Q01581 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.02□□□□□ -0.16
HMGCS1Q01581 KRT8P4-201ENST00000509735 1454 ntBASIC14.02□□□□□ -0.16
HMGCS1Q01581 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.02□□□□□ -0.16
HMGCS1Q01581 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.02□□□□□ -0.16
HMGCS1Q01581 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.02□□□□□ -0.16
HMGCS1Q01581 AC009093.10-201ENST00000641956 1442 ntBASIC14.02□□□□□ -0.16
HMGCS1Q01581 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGCS1Q01581 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGCS1Q01581 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGCS1Q01581 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGCS1Q01581 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGCS1Q01581 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGCS1Q01581 AL161932.2-201ENST00000435436 679 ntBASIC14.02□□□□□ -0.17
HMGCS1Q01581 AC007551.1-201ENST00000457394 519 ntBASIC14.02□□□□□ -0.17
HMGCS1Q01581 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGCS1Q01581 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGCS1Q01581 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HMGCS1Q01581 KRT90P-201ENST00000549264 1064 ntBASIC14.02□□□□□ -0.17
HMGCS1Q01581 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 RN7SL713P-201ENST00000582127 302 ntBASIC14.02□□□□□ -0.17
HMGCS1Q01581 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 AL358472.3-201ENST00000608147 415 ntBASIC14.02□□□□□ -0.17
HMGCS1Q01581 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGCS1Q01581 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGCS1Q01581 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGCS1Q01581 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGCS1Q01581 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGCS1Q01581 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGCS1Q01581 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGCS1Q01581 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HMGCS1Q01581 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
HMGCS1Q01581 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms