Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.66□□□□□ -0.38
UBA52P62987 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
UBA52P62987 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
UBA52P62987 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
UBA52P62987 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
UBA52P62987 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.66□□□□□ -0.38
UBA52P62987 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.66□□□□□ -0.38
UBA52P62987 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.66□□□□□ -0.38
UBA52P62987 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
UBA52P62987 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.65□□□□□ -0.38
UBA52P62987 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.65□□□□□ -0.38
UBA52P62987 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
UBA52P62987 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
UBA52P62987 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.65□□□□□ -0.38
UBA52P62987 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
UBA52P62987 STRCP1-201ENST00000509801 5328 ntBASIC12.65□□□□□ -0.38
UBA52P62987 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
UBA52P62987 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
UBA52P62987 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
UBA52P62987 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.65□□□□□ -0.38
UBA52P62987 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.65□□□□□ -0.38
UBA52P62987 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.65□□□□□ -0.38
UBA52P62987 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.65□□□□□ -0.38
UBA52P62987 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.65□□□□□ -0.38
UBA52P62987 RPL7P3-201ENST00000441388 714 ntBASIC12.65□□□□□ -0.38
UBA52P62987 CSF2RBP1-201ENST00000447905 391 ntBASIC12.65□□□□□ -0.38
UBA52P62987 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.65□□□□□ -0.38
UBA52P62987 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.65□□□□□ -0.38
UBA52P62987 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.65□□□□□ -0.38
UBA52P62987 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
UBA52P62987 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.65□□□□□ -0.38
UBA52P62987 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.65□□□□□ -0.38
UBA52P62987 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.65□□□□□ -0.38
UBA52P62987 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.65□□□□□ -0.38
UBA52P62987 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.65□□□□□ -0.38
UBA52P62987 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 INTS4P2-202ENST00000614726 2019 ntBASIC12.65□□□□□ -0.38
UBA52P62987 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
UBA52P62987 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.65□□□□□ -0.38
UBA52P62987 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
UBA52P62987 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
UBA52P62987 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
UBA52P62987 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
UBA52P62987 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.65□□□□□ -0.39
UBA52P62987 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.64□□□□□ -0.39
UBA52P62987 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.64□□□□□ -0.39
UBA52P62987 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.64□□□□□ -0.39
UBA52P62987 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
UBA52P62987 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.64□□□□□ -0.39
UBA52P62987 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
UBA52P62987 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
UBA52P62987 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.64□□□□□ -0.39
UBA52P62987 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.64□□□□□ -0.39
UBA52P62987 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.64□□□□□ -0.39
UBA52P62987 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.64□□□□□ -0.39
UBA52P62987 TARDBPP1-201ENST00000442013 1203 ntBASIC12.64□□□□□ -0.39
UBA52P62987 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
UBA52P62987 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.64□□□□□ -0.39
UBA52P62987 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UBA52P62987 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms