Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 KRT17P4-201ENST00000429445 819 ntBASIC13.89□□□□□ -0.19
CLDN6P56747 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN6P56747 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC13.89□□□□□ -0.19
CLDN6P56747 EIF5AP2-201ENST00000585668 1047 ntBASIC13.89□□□□□ -0.19
CLDN6P56747 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC13.89□□□□□ -0.19
CLDN6P56747 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.89□□□□□ -0.19
CLDN6P56747 AC009145.4-201ENST00000625119 1294 ntBASIC13.89□□□□□ -0.19
CLDN6P56747 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN6P56747 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CLDN6P56747 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CLDN6P56747 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CLDN6P56747 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CLDN6P56747 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 AP002353.1-201ENST00000528257 1599 ntBASIC13.88□□□□□ -0.19
CLDN6P56747 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.88□□□□□ -0.19
CLDN6P56747 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CLDN6P56747 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN6P56747 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
CLDN6P56747 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CLDN6P56747 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC13.88□□□□□ -0.19
CLDN6P56747 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.88□□□□□ -0.19
CLDN6P56747 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.88□□□□□ -0.19
CLDN6P56747 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC13.88□□□□□ -0.19
CLDN6P56747 AP000322.3-201ENST00000608665 388 ntBASIC13.88□□□□□ -0.19
CLDN6P56747 AC073592.2-201ENST00000623062 780 ntBASIC13.88□□□□□ -0.19
CLDN6P56747 AC011471.3-201ENST00000623576 402 ntBASIC13.88□□□□□ -0.19
CLDN6P56747 AC138466.5-201ENST00000624002 808 ntBASIC13.88□□□□□ -0.19
CLDN6P56747 AL451007.2-201ENST00000632004 563 ntBASIC13.88□□□□□ -0.19
CLDN6P56747 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN6P56747 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.88□□□□□ -0.19
CLDN6P56747 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.88□□□□□ -0.19
CLDN6P56747 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CLDN6P56747 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CLDN6P56747 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN6P56747 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN6P56747 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN6P56747 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
CLDN6P56747 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN6P56747 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN6P56747 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.87□□□□□ -0.19
CLDN6P56747 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CLDN6P56747 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN6P56747 AC108734.2-201ENST00000420887 1069 ntBASIC13.87□□□□□ -0.19
CLDN6P56747 OR8T1P-201ENST00000421347 918 ntBASIC13.87□□□□□ -0.19
CLDN6P56747 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN6P56747 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN6P56747 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC13.87□□□□□ -0.19
CLDN6P56747 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CLDN6P56747 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN6P56747 RN7SL357P-201ENST00000581065 298 ntBASIC13.87□□□□□ -0.19
CLDN6P56747 MIR4472-1-201ENST00000584349 80 ntBASIC13.87□□□□□ -0.19
CLDN6P56747 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC13.87□□□□□ -0.19
CLDN6P56747 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC13.87□□□□□ -0.19
CLDN6P56747 AC244250.3-201ENST00000620749 366 ntBASIC13.87□□□□□ -0.19
CLDN6P56747 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CLDN6P56747 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.87□□□□□ -0.19
CLDN6P56747 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms