Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.59■□□□□ 0.09
VCPP55072 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.59■□□□□ 0.09
VCPP55072 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.59■□□□□ 0.09
VCPP55072 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.59■□□□□ 0.09
VCPP55072 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
VCPP55072 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.59■□□□□ 0.09
VCPP55072 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 PDIA3P2-201ENST00000428073 158 ntBASIC15.59■□□□□ 0.09
VCPP55072 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.59■□□□□ 0.09
VCPP55072 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 AC100850.1-201ENST00000506768 649 ntBASIC15.59■□□□□ 0.09
VCPP55072 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.59■□□□□ 0.09
VCPP55072 DUX4L47-201ENST00000566374 394 ntBASIC15.59■□□□□ 0.09
VCPP55072 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.59■□□□□ 0.09
VCPP55072 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.59■□□□□ 0.09
VCPP55072 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.59■□□□□ 0.09
VCPP55072 AC073413.1-201ENST00000603927 732 ntBASIC15.59■□□□□ 0.09
VCPP55072 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.59■□□□□ 0.09
VCPP55072 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
VCPP55072 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
VCPP55072 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
VCPP55072 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
VCPP55072 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.59■□□□□ 0.09
VCPP55072 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
VCPP55072 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.59■□□□□ 0.09
VCPP55072 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
VCPP55072 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
VCPP55072 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VCPP55072 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.59■□□□□ 0.09
VCPP55072 KRT8P4-201ENST00000509735 1454 ntBASIC15.59■□□□□ 0.09
VCPP55072 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
VCPP55072 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VCPP55072 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VCPP55072 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VCPP55072 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VCPP55072 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VCPP55072 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
VCPP55072 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
VCPP55072 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
VCPP55072 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
VCPP55072 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VCPP55072 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.58■□□□□ 0.09
VCPP55072 AC097376.2-205ENST00000610159 5334 ntBASIC15.58■□□□□ 0.09
VCPP55072 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.58■□□□□ 0.09
VCPP55072 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCPP55072 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCPP55072 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCPP55072 AC136759.1-202ENST00000530858 2194 ntBASIC15.58■□□□□ 0.08
VCPP55072 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCPP55072 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
VCPP55072 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
VCPP55072 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VCPP55072 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VCPP55072 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
VCPP55072 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.58■□□□□ 0.08
VCPP55072 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VCPP55072 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCPP55072 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCPP55072 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCPP55072 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.58■□□□□ 0.08
VCPP55072 AC006335.1-201ENST00000445200 547 ntBASIC15.58■□□□□ 0.08
VCPP55072 AC104073.2-201ENST00000453737 312 ntBASIC15.58■□□□□ 0.08
VCPP55072 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.58■□□□□ 0.08
VCPP55072 AC022447.6-201ENST00000515522 438 ntBASIC15.58■□□□□ 0.08
VCPP55072 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.58■□□□□ 0.08
VCPP55072 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.58■□□□□ 0.08
VCPP55072 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
VCPP55072 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.58■□□□□ 0.08
VCPP55072 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
VCPP55072 AL136301.1-201ENST00000615830 422 ntBASIC15.58■□□□□ 0.08
VCPP55072 AL023803.2-201ENST00000620080 638 ntBASIC15.58■□□□□ 0.08
VCPP55072 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.58■□□□□ 0.08
VCPP55072 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCPP55072 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
VCPP55072 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCPP55072 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VCPP55072 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCPP55072 AC152010.1-201ENST00000415779 2006 ntBASIC15.58■□□□□ 0.08
VCPP55072 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
VCPP55072 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VCPP55072 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VCPP55072 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
VCPP55072 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VCPP55072 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
VCPP55072 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms