Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
PDX1P52945 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC14.12□□□□□ -0.15
PDX1P52945 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.12□□□□□ -0.15
PDX1P52945 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.12□□□□□ -0.15
PDX1P52945 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.12□□□□□ -0.15
PDX1P52945 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PDX1P52945 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.12□□□□□ -0.15
PDX1P52945 AC026803.1-201ENST00000569130 274 ntBASIC14.12□□□□□ -0.15
PDX1P52945 MIR3677-201ENST00000578964 60 ntBASIC14.12□□□□□ -0.15
PDX1P52945 MIR4750-201ENST00000584564 56 ntBASIC14.12□□□□□ -0.15
PDX1P52945 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
PDX1P52945 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.12□□□□□ -0.15
PDX1P52945 AC138894.2-201ENST00000602838 371 ntBASIC14.12□□□□□ -0.15
PDX1P52945 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PDX1P52945 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDX1P52945 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PDX1P52945 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
PDX1P52945 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PDX1P52945 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.12□□□□□ -0.15
PDX1P52945 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PDX1P52945 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDX1P52945 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDX1P52945 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDX1P52945 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDX1P52945 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.12□□□□□ -0.15
PDX1P52945 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PDX1P52945 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
PDX1P52945 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.11□□□□□ -0.15
PDX1P52945 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PDX1P52945 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
PDX1P52945 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PDX1P52945 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.11□□□□□ -0.15
PDX1P52945 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
PDX1P52945 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.11□□□□□ -0.15
PDX1P52945 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
PDX1P52945 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 AL627231.1-201ENST00000394467 1125 ntBASIC14.11□□□□□ -0.15
PDX1P52945 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.11□□□□□ -0.15
PDX1P52945 RPL8P2-201ENST00000430538 502 ntBASIC14.11□□□□□ -0.15
PDX1P52945 AC078991.1-201ENST00000437297 610 ntBASIC14.11□□□□□ -0.15
PDX1P52945 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PDX1P52945 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.11□□□□□ -0.15
PDX1P52945 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.11□□□□□ -0.15
PDX1P52945 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.11□□□□□ -0.15
PDX1P52945 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.11□□□□□ -0.15
PDX1P52945 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 AC092171.5-201ENST00000608012 942 ntBASIC14.11□□□□□ -0.15
PDX1P52945 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
PDX1P52945 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.11□□□□□ -0.15
PDX1P52945 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.11□□□□□ -0.15
PDX1P52945 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.11□□□□□ -0.15
PDX1P52945 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.11□□□□□ -0.15
PDX1P52945 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PDX1P52945 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PDX1P52945 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PDX1P52945 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.11□□□□□ -0.15
PDX1P52945 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.11□□□□□ -0.15
PDX1P52945 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PDX1P52945 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PDX1P52945 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PDX1P52945 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
PDX1P52945 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.1□□□□□ -0.15
PDX1P52945 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
PDX1P52945 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
PDX1P52945 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PDX1P52945 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.1□□□□□ -0.15
PDX1P52945 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PDX1P52945 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.1□□□□□ -0.15
PDX1P52945 AC005912.2-201ENST00000619492 2400 ntBASIC14.1□□□□□ -0.15
PDX1P52945 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.1□□□□□ -0.15
PDX1P52945 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.1□□□□□ -0.15
PDX1P52945 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PDX1P52945 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms