Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.54□□□□□ -0.56
CDC34P49427 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.54□□□□□ -0.56
CDC34P49427 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
CDC34P49427 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC11.54□□□□□ -0.56
CDC34P49427 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
CDC34P49427 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
CDC34P49427 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC11.54□□□□□ -0.56
CDC34P49427 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
CDC34P49427 FAM58DP-201ENST00000428076 619 ntBASIC11.54□□□□□ -0.56
CDC34P49427 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC11.54□□□□□ -0.56
CDC34P49427 SPDYE14P-201ENST00000442619 822 ntBASIC11.54□□□□□ -0.56
CDC34P49427 RN7SL618P-201ENST00000477850 296 ntBASIC11.54□□□□□ -0.56
CDC34P49427 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC11.54□□□□□ -0.56
CDC34P49427 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.54□□□□□ -0.56
CDC34P49427 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11.54□□□□□ -0.56
CDC34P49427 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
CDC34P49427 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.54□□□□□ -0.56
CDC34P49427 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CDC34P49427 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
CDC34P49427 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC11.54□□□□□ -0.56
CDC34P49427 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 TUBB3P1-201ENST00000405796 1332 ntBASIC11.54□□□□□ -0.56
CDC34P49427 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 AP002761.4-201ENST00000565433 3361 ntBASIC11.54□□□□□ -0.56
CDC34P49427 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CDC34P49427 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC11.54□□□□□ -0.56
CDC34P49427 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
CDC34P49427 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC11.53□□□□□ -0.56
CDC34P49427 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
CDC34P49427 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
CDC34P49427 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
CDC34P49427 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.53□□□□□ -0.56
CDC34P49427 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC11.53□□□□□ -0.56
CDC34P49427 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.53□□□□□ -0.56
CDC34P49427 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC11.53□□□□□ -0.56
CDC34P49427 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC11.53□□□□□ -0.56
CDC34P49427 AC040169.1-201ENST00000565382 521 ntBASIC11.53□□□□□ -0.56
CDC34P49427 MIR4453-201ENST00000584019 89 ntBASIC11.53□□□□□ -0.56
CDC34P49427 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC11.53□□□□□ -0.56
CDC34P49427 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC11.53□□□□□ -0.56
CDC34P49427 AC022145.2-201ENST00000598203 171 ntBASIC11.53□□□□□ -0.56
CDC34P49427 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 C20orf181-201ENST00000623918 480 ntBASIC11.53□□□□□ -0.56
CDC34P49427 AL109936.8-201ENST00000641772 604 ntBASIC11.53□□□□□ -0.56
CDC34P49427 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC11.53□□□□□ -0.56
CDC34P49427 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
CDC34P49427 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
CDC34P49427 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC11.53□□□□□ -0.56
CDC34P49427 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
CDC34P49427 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
CDC34P49427 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.53□□□□□ -0.56
CDC34P49427 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
CDC34P49427 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
CDC34P49427 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms