Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGCLP35914 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HMGCLP35914 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.4□□□□□ -0.1
HMGCLP35914 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.4□□□□□ -0.1
HMGCLP35914 AC243960.2-201ENST00000600996 747 ntBASIC14.4□□□□□ -0.1
HMGCLP35914 AC138649.2-201ENST00000615886 705 ntBASIC14.4□□□□□ -0.1
HMGCLP35914 MIR6799-201ENST00000620297 69 ntBASIC14.4□□□□□ -0.1
HMGCLP35914 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.4□□□□□ -0.1
HMGCLP35914 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 AC090643.2-201ENST00000623442 2029 ntBASIC14.4□□□□□ -0.1
HMGCLP35914 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HMGCLP35914 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HMGCLP35914 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGCLP35914 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 GRK6P1-201ENST00000400595 1711 ntBASIC14.4□□□□□ -0.1
HMGCLP35914 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.4□□□□□ -0.1
HMGCLP35914 AL137784.3-201ENST00000623858 2288 ntBASIC14.4□□□□□ -0.1
HMGCLP35914 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.4□□□□□ -0.1
HMGCLP35914 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMGCLP35914 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.4□□□□□ -0.1
HMGCLP35914 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
HMGCLP35914 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
HMGCLP35914 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.39□□□□□ -0.11
HMGCLP35914 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.39□□□□□ -0.11
HMGCLP35914 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.39□□□□□ -0.11
HMGCLP35914 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGCLP35914 CCT8L1P-201ENST00000465400 1674 ntBASIC14.39□□□□□ -0.11
HMGCLP35914 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 AP002353.1-201ENST00000528257 1599 ntBASIC14.39□□□□□ -0.11
HMGCLP35914 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HMGCLP35914 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGCLP35914 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
HMGCLP35914 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.39□□□□□ -0.11
HMGCLP35914 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HMGCLP35914 AC092580.1-201ENST00000433998 658 ntBASIC14.39□□□□□ -0.11
HMGCLP35914 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.39□□□□□ -0.11
HMGCLP35914 KRT8P13-201ENST00000463294 1010 ntBASIC14.39□□□□□ -0.11
HMGCLP35914 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.39□□□□□ -0.11
HMGCLP35914 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.39□□□□□ -0.11
HMGCLP35914 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.39□□□□□ -0.11
HMGCLP35914 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HMGCLP35914 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
HMGCLP35914 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGCLP35914 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.39□□□□□ -0.11
HMGCLP35914 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HMGCLP35914 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HMGCLP35914 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.39□□□□□ -0.11
HMGCLP35914 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HMGCLP35914 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
HMGCLP35914 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HMGCLP35914 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCLP35914 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCLP35914 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCLP35914 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCLP35914 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.38□□□□□ -0.11
HMGCLP35914 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCLP35914 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HMGCLP35914 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCLP35914 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.38□□□□□ -0.11
HMGCLP35914 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGCLP35914 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCLP35914 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HMGCLP35914 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCLP35914 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCLP35914 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCLP35914 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCLP35914 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
HMGCLP35914 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms