Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 SLC25A47P1-201ENST00000531577 414 ntBASIC15.94■□□□□ 0.14
KRT9P35527 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.94■□□□□ 0.14
KRT9P35527 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.94■□□□□ 0.14
KRT9P35527 ENPP7P14-201ENST00000621765 1040 ntBASIC15.94■□□□□ 0.14
KRT9P35527 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.94■□□□□ 0.14
KRT9P35527 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
KRT9P35527 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.94■□□□□ 0.14
KRT9P35527 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
KRT9P35527 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.94■□□□□ 0.14
KRT9P35527 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
KRT9P35527 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
KRT9P35527 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
KRT9P35527 CU639417.3-201ENST00000624240 1404 ntBASIC15.94■□□□□ 0.14
KRT9P35527 CLUHP2-201ENST00000426660 1303 ntBASIC15.94■□□□□ 0.14
KRT9P35527 TUBB8P4-201ENST00000511806 1324 ntBASIC15.94■□□□□ 0.14
KRT9P35527 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.93■□□□□ 0.14
KRT9P35527 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT9P35527 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT9P35527 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT9P35527 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
KRT9P35527 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT9P35527 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.93■□□□□ 0.14
KRT9P35527 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT9P35527 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT9P35527 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT9P35527 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
KRT9P35527 AC005229.1-201ENST00000392885 409 ntBASIC15.93■□□□□ 0.14
KRT9P35527 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.93■□□□□ 0.14
KRT9P35527 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
KRT9P35527 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.93■□□□□ 0.14
KRT9P35527 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT9P35527 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.93■□□□□ 0.14
KRT9P35527 TTTY23B-201ENST00000442790 549 ntBASIC15.93■□□□□ 0.14
KRT9P35527 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.93■□□□□ 0.14
KRT9P35527 AC106760.1-201ENST00000508690 800 ntBASIC15.93■□□□□ 0.14
KRT9P35527 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
KRT9P35527 AC132938.2-201ENST00000579188 680 ntBASIC15.93■□□□□ 0.14
KRT9P35527 RN7SL48P-201ENST00000579283 293 ntBASIC15.93■□□□□ 0.14
KRT9P35527 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.93■□□□□ 0.14
KRT9P35527 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.93■□□□□ 0.14
KRT9P35527 BX088702.1-201ENST00000610784 235 ntBASIC15.93■□□□□ 0.14
KRT9P35527 AL591163.1-201ENST00000641757 987 ntBASIC15.93■□□□□ 0.14
KRT9P35527 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT9P35527 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
KRT9P35527 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT9P35527 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT9P35527 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT9P35527 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT9P35527 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT9P35527 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
KRT9P35527 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
KRT9P35527 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
KRT9P35527 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
KRT9P35527 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
KRT9P35527 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.93■□□□□ 0.14
KRT9P35527 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
KRT9P35527 COL6A4P2-202ENST00000504443 2753 ntBASIC15.92■□□□□ 0.14
KRT9P35527 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
KRT9P35527 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
KRT9P35527 AL138709.1-201ENST00000614840 1693 ntBASIC15.92■□□□□ 0.14
KRT9P35527 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT9P35527 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KRT9P35527 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.92■□□□□ 0.14
KRT9P35527 AL590440.2-201ENST00000641973 1595 ntBASIC15.92■□□□□ 0.14
KRT9P35527 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KRT9P35527 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT9P35527 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
KRT9P35527 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT9P35527 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.92■□□□□ 0.14
KRT9P35527 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.92■□□□□ 0.14
KRT9P35527 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT9P35527 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KRT9P35527 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT9P35527 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.92■□□□□ 0.14
KRT9P35527 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
KRT9P35527 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT9P35527 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT9P35527 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT9P35527 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
KRT9P35527 TPM3P8-201ENST00000330554 643 ntBASIC15.92■□□□□ 0.14
KRT9P35527 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
KRT9P35527 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.92■□□□□ 0.14
KRT9P35527 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.92■□□□□ 0.14
KRT9P35527 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.92■□□□□ 0.14
KRT9P35527 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.92■□□□□ 0.14
KRT9P35527 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.92■□□□□ 0.14
KRT9P35527 MESTP3-201ENST00000503460 968 ntBASIC15.92■□□□□ 0.14
KRT9P35527 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.92■□□□□ 0.14
KRT9P35527 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
KRT9P35527 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.92■□□□□ 0.14
KRT9P35527 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms