Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
LMO1P25800 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.2□□□□□ -0.46
LMO1P25800 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
LMO1P25800 MIR326-201ENST00000362220 95 ntBASIC12.2□□□□□ -0.46
LMO1P25800 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.2□□□□□ -0.46
LMO1P25800 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LMO1P25800 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.2□□□□□ -0.46
LMO1P25800 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.2□□□□□ -0.46
LMO1P25800 KLF2P4-201ENST00000451959 1225 ntBASIC12.2□□□□□ -0.46
LMO1P25800 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
LMO1P25800 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.2□□□□□ -0.46
LMO1P25800 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.2□□□□□ -0.46
LMO1P25800 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.2□□□□□ -0.46
LMO1P25800 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.2□□□□□ -0.46
LMO1P25800 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.2□□□□□ -0.46
LMO1P25800 AC132192.2-201ENST00000596206 1147 ntBASIC12.2□□□□□ -0.46
LMO1P25800 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.2□□□□□ -0.46
LMO1P25800 AC017083.2-201ENST00000608069 979 ntBASIC12.2□□□□□ -0.46
LMO1P25800 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
LMO1P25800 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
LMO1P25800 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
LMO1P25800 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
LMO1P25800 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.2□□□□□ -0.46
LMO1P25800 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
LMO1P25800 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LMO1P25800 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 AC097376.2-205ENST00000610159 5334 ntBASIC12.19□□□□□ -0.46
LMO1P25800 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.19□□□□□ -0.46
LMO1P25800 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.19□□□□□ -0.46
LMO1P25800 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
LMO1P25800 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
LMO1P25800 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.19□□□□□ -0.46
LMO1P25800 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.19□□□□□ -0.46
LMO1P25800 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.19□□□□□ -0.46
LMO1P25800 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LMO1P25800 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LMO1P25800 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
LMO1P25800 AL157407.1-201ENST00000435784 904 ntBASIC12.19□□□□□ -0.46
LMO1P25800 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.19□□□□□ -0.46
LMO1P25800 CROCCP4-201ENST00000457096 498 ntBASIC12.19□□□□□ -0.46
LMO1P25800 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.19□□□□□ -0.46
LMO1P25800 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.19□□□□□ -0.46
LMO1P25800 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.19□□□□□ -0.46
LMO1P25800 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LMO1P25800 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.19□□□□□ -0.46
LMO1P25800 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
LMO1P25800 MIR600HG-201ENST00000449175 5984 ntBASIC12.19□□□□□ -0.46
LMO1P25800 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.19□□□□□ -0.46
LMO1P25800 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.19□□□□□ -0.46
LMO1P25800 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
LMO1P25800 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LMO1P25800 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO1P25800 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LMO1P25800 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.18□□□□□ -0.46
LMO1P25800 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms