Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.47□□□□□ -0.41
CCL1P22362 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL1P22362 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.47□□□□□ -0.41
CCL1P22362 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.47□□□□□ -0.41
CCL1P22362 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.47□□□□□ -0.41
CCL1P22362 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CCL1P22362 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.46□□□□□ -0.41
CCL1P22362 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCL1P22362 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL1P22362 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL1P22362 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.46□□□□□ -0.41
CCL1P22362 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
CCL1P22362 AL928654.5-201ENST00000624831 2501 ntBASIC12.46□□□□□ -0.41
CCL1P22362 SBF1P1-201ENST00000444527 5631 ntBASIC12.46□□□□□ -0.41
CCL1P22362 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.46□□□□□ -0.41
CCL1P22362 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCL1P22362 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL1P22362 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCL1P22362 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL1P22362 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL1P22362 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.46□□□□□ -0.41
CCL1P22362 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.46□□□□□ -0.41
CCL1P22362 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL1P22362 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL1P22362 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.46□□□□□ -0.41
CCL1P22362 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.46□□□□□ -0.41
CCL1P22362 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL1P22362 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL1P22362 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.46□□□□□ -0.41
CCL1P22362 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.46□□□□□ -0.41
CCL1P22362 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.46□□□□□ -0.41
CCL1P22362 HOMER2P2-201ENST00000451621 847 ntBASIC12.46□□□□□ -0.41
CCL1P22362 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.46□□□□□ -0.41
CCL1P22362 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
CCL1P22362 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CCL1P22362 RBM8B-201ENST00000555532 525 ntBASIC12.46□□□□□ -0.41
CCL1P22362 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.46□□□□□ -0.41
CCL1P22362 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.46□□□□□ -0.41
CCL1P22362 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CCL1P22362 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.46□□□□□ -0.41
CCL1P22362 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.46□□□□□ -0.41
CCL1P22362 AC090386.2-201ENST00000623010 1039 ntBASIC12.46□□□□□ -0.41
CCL1P22362 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CCL1P22362 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.46□□□□□ -0.41
CCL1P22362 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.46□□□□□ -0.42
CCL1P22362 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCL1P22362 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCL1P22362 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCL1P22362 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
CCL1P22362 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CCL1P22362 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCL1P22362 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
CCL1P22362 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCL1P22362 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
CCL1P22362 AC135782.3-201ENST00000562782 2105 ntBASIC12.46□□□□□ -0.42
CCL1P22362 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CCL1P22362 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.46□□□□□ -0.42
CCL1P22362 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCL1P22362 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCL1P22362 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CCL1P22362 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.46□□□□□ -0.42
CCL1P22362 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 PPT1-213ENST00000641319 2388 ntBASIC12.45□□□□□ -0.42
CCL1P22362 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CCL1P22362 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL1P22362 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CCL1P22362 AC244394.1-201ENST00000435000 1665 ntBASIC12.45□□□□□ -0.42
CCL1P22362 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
CCL1P22362 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CCL1P22362 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL1P22362 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.45□□□□□ -0.42
CCL1P22362 AL391647.1-201ENST00000395664 511 ntBASIC12.45□□□□□ -0.42
CCL1P22362 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.45□□□□□ -0.42
CCL1P22362 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL1P22362 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL1P22362 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL1P22362 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCL1P22362 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
CCL1P22362 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.45□□□□□ -0.42
CCL1P22362 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.45□□□□□ -0.42
CCL1P22362 AL512310.5-201ENST00000551999 515 ntBASIC12.45□□□□□ -0.42
CCL1P22362 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms