Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.05□□□□□ -0.16
CAPN3P20807 AL359711.2-201ENST00000563105 872 ntBASIC14.05□□□□□ -0.16
CAPN3P20807 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.05□□□□□ -0.16
CAPN3P20807 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.05□□□□□ -0.16
CAPN3P20807 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CAPN3P20807 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.05□□□□□ -0.16
CAPN3P20807 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.05□□□□□ -0.16
CAPN3P20807 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
CAPN3P20807 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CAPN3P20807 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CAPN3P20807 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CAPN3P20807 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 AC005562.1-201ENST00000583030 3219 ntBASIC14.05□□□□□ -0.16
CAPN3P20807 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.05□□□□□ -0.16
CAPN3P20807 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.05□□□□□ -0.16
CAPN3P20807 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CAPN3P20807 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
CAPN3P20807 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CAPN3P20807 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CAPN3P20807 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CAPN3P20807 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CAPN3P20807 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CAPN3P20807 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.04□□□□□ -0.16
CAPN3P20807 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CAPN3P20807 ELK2AP-201ENST00000392510 1007 ntBASIC14.04□□□□□ -0.16
CAPN3P20807 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CAPN3P20807 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.04□□□□□ -0.16
CAPN3P20807 AL355994.2-201ENST00000447882 704 ntBASIC14.04□□□□□ -0.16
CAPN3P20807 BNIP3P42-201ENST00000454982 569 ntBASIC14.04□□□□□ -0.16
CAPN3P20807 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.04□□□□□ -0.16
CAPN3P20807 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CAPN3P20807 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CAPN3P20807 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.04□□□□□ -0.16
CAPN3P20807 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.04□□□□□ -0.16
CAPN3P20807 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.04□□□□□ -0.16
CAPN3P20807 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.04□□□□□ -0.16
CAPN3P20807 CTBP2P3-201ENST00000585629 1255 ntBASIC14.04□□□□□ -0.16
CAPN3P20807 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CAPN3P20807 BTNL10-201ENST00000595971 695 ntBASIC14.04□□□□□ -0.16
CAPN3P20807 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.04□□□□□ -0.16
CAPN3P20807 BNIP3P29-201ENST00000598302 571 ntBASIC14.04□□□□□ -0.16
CAPN3P20807 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.04□□□□□ -0.16
CAPN3P20807 AC011447.5-201ENST00000616168 564 ntBASIC14.04□□□□□ -0.16
CAPN3P20807 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.04□□□□□ -0.16
CAPN3P20807 GPR182-203ENST00000622922 591 ntBASIC14.04□□□□□ -0.16
CAPN3P20807 AL033527.5-201ENST00000641382 801 ntBASIC14.04□□□□□ -0.16
CAPN3P20807 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CAPN3P20807 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CAPN3P20807 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.04□□□□□ -0.16
CAPN3P20807 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 AL590440.2-201ENST00000641973 1595 ntBASIC14.04□□□□□ -0.16
CAPN3P20807 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CAPN3P20807 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CAPN3P20807 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
CAPN3P20807 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CAPN3P20807 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.03□□□□□ -0.16
CAPN3P20807 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CAPN3P20807 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CAPN3P20807 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAPN3P20807 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms