Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NCLP19338 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCLP19338 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCLP19338 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCLP19338 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCLP19338 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCLP19338 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCLP19338 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
NCLP19338 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCLP19338 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.44■□□□□ 0.38
NCLP19338 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.44■□□□□ 0.38
NCLP19338 AC087499.6-201ENST00000411576 835 ntBASIC17.44■□□□□ 0.38
NCLP19338 COX5BP8-201ENST00000416911 349 ntBASIC17.44■□□□□ 0.38
NCLP19338 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.44■□□□□ 0.38
NCLP19338 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.44■□□□□ 0.38
NCLP19338 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.44■□□□□ 0.38
NCLP19338 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.44■□□□□ 0.38
NCLP19338 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.44■□□□□ 0.38
NCLP19338 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.44■□□□□ 0.38
NCLP19338 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCLP19338 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCLP19338 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCLP19338 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NCLP19338 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.44■□□□□ 0.38
NCLP19338 AGGF1P1-201ENST00000509500 2073 ntBASIC17.44■□□□□ 0.38
NCLP19338 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCLP19338 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCLP19338 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCLP19338 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.44■□□□□ 0.38
NCLP19338 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCLP19338 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NCLP19338 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
NCLP19338 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NCLP19338 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NCLP19338 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
NCLP19338 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCLP19338 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NCLP19338 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCLP19338 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCLP19338 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.43■□□□□ 0.38
NCLP19338 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC17.43■□□□□ 0.38
NCLP19338 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NCLP19338 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCLP19338 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCLP19338 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NCLP19338 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCLP19338 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC17.43■□□□□ 0.38
NCLP19338 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC17.43■□□□□ 0.38
NCLP19338 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCLP19338 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NCLP19338 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.43■□□□□ 0.38
NCLP19338 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.43■□□□□ 0.38
NCLP19338 HLA-K-203ENST00000430151 1046 ntBASIC17.43■□□□□ 0.38
NCLP19338 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCLP19338 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.43■□□□□ 0.38
NCLP19338 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.43■□□□□ 0.38
NCLP19338 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.43■□□□□ 0.38
NCLP19338 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.43■□□□□ 0.38
NCLP19338 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.43■□□□□ 0.38
NCLP19338 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.43■□□□□ 0.38
NCLP19338 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NCLP19338 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.43■□□□□ 0.38
NCLP19338 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NCLP19338 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCLP19338 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCLP19338 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NCLP19338 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCLP19338 CLK3P2-201ENST00000427566 1453 ntBASIC17.43■□□□□ 0.38
NCLP19338 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NCLP19338 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NCLP19338 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NCLP19338 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
NCLP19338 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NCLP19338 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.42■□□□□ 0.38
NCLP19338 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC17.42■□□□□ 0.38
NCLP19338 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.42■□□□□ 0.38
NCLP19338 SLC7A15P-201ENST00000424028 1363 ntBASIC17.42■□□□□ 0.38
NCLP19338 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NCLP19338 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
NCLP19338 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NCLP19338 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.42■□□□□ 0.38
NCLP19338 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.42■□□□□ 0.38
NCLP19338 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NCLP19338 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.42■□□□□ 0.38
NCLP19338 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.42■□□□□ 0.38
NCLP19338 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.42■□□□□ 0.38
NCLP19338 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.42■□□□□ 0.38
NCLP19338 AC092337.1-201ENST00000568699 1129 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms