Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.04□□□□□ -0.32
HLA-DOBP13765 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 AC011474.4-201ENST00000623523 2076 ntBASIC13.03□□□□□ -0.32
HLA-DOBP13765 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 AL161932.2-201ENST00000435436 679 ntBASIC13.03□□□□□ -0.32
HLA-DOBP13765 YBX1P6-201ENST00000442962 1002 ntBASIC13.03□□□□□ -0.32
HLA-DOBP13765 KLF2P1-201ENST00000447438 1042 ntBASIC13.03□□□□□ -0.32
HLA-DOBP13765 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 IGHV3-71-201ENST00000523324 359 ntBASIC13.03□□□□□ -0.32
HLA-DOBP13765 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 AC009542.2-202ENST00000619004 1067 ntBASIC13.03□□□□□ -0.32
HLA-DOBP13765 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 AC064801.2-201ENST00000625052 1303 ntBASIC13.03□□□□□ -0.32
HLA-DOBP13765 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.03□□□□□ -0.32
HLA-DOBP13765 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HLA-DOBP13765 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DOBP13765 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.02□□□□□ -0.32
HLA-DOBP13765 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
HLA-DOBP13765 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DOBP13765 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DOBP13765 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DOBP13765 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DOBP13765 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DOBP13765 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DOBP13765 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
HLA-DOBP13765 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DOBP13765 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
HLA-DOBP13765 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DOBP13765 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
HLA-DOBP13765 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DOBP13765 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DOBP13765 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DOBP13765 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HLA-DOBP13765 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.02□□□□□ -0.32
HLA-DOBP13765 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HLA-DOBP13765 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.02□□□□□ -0.33
HLA-DOBP13765 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HLA-DOBP13765 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HLA-DOBP13765 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.02□□□□□ -0.33
HLA-DOBP13765 AL157407.1-201ENST00000435784 904 ntBASIC13.02□□□□□ -0.33
HLA-DOBP13765 AL645933.1-201ENST00000440087 609 ntBASIC13.02□□□□□ -0.33
HLA-DOBP13765 BNIP3P42-201ENST00000454982 569 ntBASIC13.02□□□□□ -0.33
HLA-DOBP13765 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.02□□□□□ -0.33
HLA-DOBP13765 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HLA-DOBP13765 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.02□□□□□ -0.33
HLA-DOBP13765 AC005586.2-201ENST00000563946 837 ntBASIC13.02□□□□□ -0.33
HLA-DOBP13765 DUX4L45-201ENST00000566406 1057 ntBASIC13.02□□□□□ -0.33
HLA-DOBP13765 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.02□□□□□ -0.33
HLA-DOBP13765 BNIP3P29-201ENST00000598302 571 ntBASIC13.02□□□□□ -0.33
HLA-DOBP13765 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.02□□□□□ -0.33
HLA-DOBP13765 MIR6720-201ENST00000611664 98 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms