Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
FREM3P0C091 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM3P0C091 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
FREM3P0C091 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
FREM3P0C091 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
FREM3P0C091 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.15□□□□□ -0.3
FREM3P0C091 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.15□□□□□ -0.3
FREM3P0C091 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.15□□□□□ -0.3
FREM3P0C091 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
FREM3P0C091 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.15□□□□□ -0.3
FREM3P0C091 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
FREM3P0C091 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.15□□□□□ -0.3
FREM3P0C091 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.15□□□□□ -0.3
FREM3P0C091 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 AC078875.1-201ENST00000431907 724 ntBASIC13.15□□□□□ -0.3
FREM3P0C091 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.15□□□□□ -0.3
FREM3P0C091 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.15□□□□□ -0.3
FREM3P0C091 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.15□□□□□ -0.3
FREM3P0C091 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.15□□□□□ -0.3
FREM3P0C091 RN7SL67P-201ENST00000492147 296 ntBASIC13.15□□□□□ -0.3
FREM3P0C091 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.15□□□□□ -0.3
FREM3P0C091 IGLV3-15-201ENST00000518356 244 ntBASIC13.15□□□□□ -0.3
FREM3P0C091 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 MIR3188-201ENST00000583494 85 ntBASIC13.15□□□□□ -0.3
FREM3P0C091 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.15□□□□□ -0.3
FREM3P0C091 AC084346.2-201ENST00000607097 949 ntBASIC13.15□□□□□ -0.3
FREM3P0C091 AC100757.4-201ENST00000626934 759 ntBASIC13.15□□□□□ -0.3
FREM3P0C091 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.15□□□□□ -0.3
FREM3P0C091 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
FREM3P0C091 AL157791.1-201ENST00000553667 1699 ntBASIC13.15□□□□□ -0.3
FREM3P0C091 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.15□□□□□ -0.3
FREM3P0C091 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.15□□□□□ -0.3
FREM3P0C091 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.15□□□□□ -0.3
FREM3P0C091 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
FREM3P0C091 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.15□□□□□ -0.3
FREM3P0C091 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.15□□□□□ -0.3
FREM3P0C091 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.15□□□□□ -0.3
FREM3P0C091 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.15□□□□□ -0.3
FREM3P0C091 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.15□□□□□ -0.3
FREM3P0C091 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 RN7SL769P-201ENST00000469386 295 ntBASIC13.15□□□□□ -0.3
FREM3P0C091 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FREM3P0C091 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.15□□□□□ -0.3
FREM3P0C091 SCARNA21-201ENST00000517026 139 ntBASIC13.15□□□□□ -0.3
FREM3P0C091 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
FREM3P0C091 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.15□□□□□ -0.3
FREM3P0C091 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.15□□□□□ -0.3
FREM3P0C091 AC068587.10-201ENST00000641210 219 ntBASIC13.15□□□□□ -0.3
FREM3P0C091 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
FREM3P0C091 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
FREM3P0C091 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
FREM3P0C091 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
FREM3P0C091 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.14□□□□□ -0.31
FREM3P0C091 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
FREM3P0C091 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.14□□□□□ -0.31
FREM3P0C091 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 AC215219.1-201ENST00000400706 1817 ntBASIC13.14□□□□□ -0.31
FREM3P0C091 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.14□□□□□ -0.31
FREM3P0C091 KRT18P9-201ENST00000604826 1300 ntBASIC13.14□□□□□ -0.31
FREM3P0C091 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FREM3P0C091 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.14□□□□□ -0.31
FREM3P0C091 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.14□□□□□ -0.31
FREM3P0C091 AC234782.1-201ENST00000451950 919 ntBASIC13.14□□□□□ -0.31
FREM3P0C091 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.14□□□□□ -0.31
FREM3P0C091 AC005740.2-201ENST00000511085 419 ntBASIC13.14□□□□□ -0.31
FREM3P0C091 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
FREM3P0C091 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.14□□□□□ -0.31
FREM3P0C091 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.14□□□□□ -0.31
FREM3P0C091 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms