Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC16.36■□□□□ 0.21
TPM3P06753 TUBB8P4-201ENST00000511806 1324 ntBASIC16.36■□□□□ 0.21
TPM3P06753 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
TPM3P06753 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC16.36■□□□□ 0.21
TPM3P06753 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC16.36■□□□□ 0.21
TPM3P06753 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TPM3P06753 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TPM3P06753 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TPM3P06753 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TPM3P06753 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TPM3P06753 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TPM3P06753 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TPM3P06753 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM3P06753 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TPM3P06753 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC16.35■□□□□ 0.21
TPM3P06753 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM3P06753 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 AC015688.4-201ENST00000580780 1647 ntBASIC16.35■□□□□ 0.21
TPM3P06753 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.35■□□□□ 0.21
TPM3P06753 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.35■□□□□ 0.21
TPM3P06753 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.35■□□□□ 0.21
TPM3P06753 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.35■□□□□ 0.21
TPM3P06753 BX842568.4-201ENST00000421222 227 ntBASIC16.35■□□□□ 0.21
TPM3P06753 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.35■□□□□ 0.21
TPM3P06753 AC025678.2-201ENST00000562061 970 ntBASIC16.35■□□□□ 0.21
TPM3P06753 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM3P06753 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.35■□□□□ 0.21
TPM3P06753 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.35■□□□□ 0.21
TPM3P06753 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TPM3P06753 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
TPM3P06753 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TPM3P06753 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
TPM3P06753 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
TPM3P06753 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM3P06753 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.35■□□□□ 0.21
TPM3P06753 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TPM3P06753 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
TPM3P06753 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 MEX3B-202ENST00000558133 4333 ntBASIC16.35■□□□□ 0.21
TPM3P06753 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TPM3P06753 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TPM3P06753 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TPM3P06753 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TPM3P06753 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TPM3P06753 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC16.34■□□□□ 0.21
TPM3P06753 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TPM3P06753 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC16.34■□□□□ 0.21
TPM3P06753 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TPM3P06753 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
TPM3P06753 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.34■□□□□ 0.21
TPM3P06753 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TPM3P06753 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.34■□□□□ 0.21
TPM3P06753 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPM3P06753 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.34■□□□□ 0.21
TPM3P06753 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.34■□□□□ 0.21
TPM3P06753 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.34■□□□□ 0.21
TPM3P06753 VDAC1P7-201ENST00000462417 847 ntBASIC16.34■□□□□ 0.21
TPM3P06753 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.34■□□□□ 0.21
TPM3P06753 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms