Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 AL031719.1-201ENST00000623365 2587 ntBASIC12.35□□□□□ -0.43
CD3DP04234 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CD3DP04234 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD3DP04234 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CD3DP04234 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD3DP04234 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD3DP04234 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
CD3DP04234 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
CD3DP04234 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD3DP04234 AL391647.1-201ENST00000395664 511 ntBASIC12.35□□□□□ -0.43
CD3DP04234 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.35□□□□□ -0.43
CD3DP04234 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.35□□□□□ -0.43
CD3DP04234 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.35□□□□□ -0.43
CD3DP04234 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.35□□□□□ -0.43
CD3DP04234 GCOM2-201ENST00000509133 1104 ntBASIC12.35□□□□□ -0.43
CD3DP04234 PGAM5P1-201ENST00000518923 814 ntBASIC12.35□□□□□ -0.43
CD3DP04234 KRT126P-201ENST00000549467 1181 ntBASIC12.35□□□□□ -0.43
CD3DP04234 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.35□□□□□ -0.43
CD3DP04234 AL049840.4-201ENST00000602422 811 ntBASIC12.35□□□□□ -0.43
CD3DP04234 AL603764.1-201ENST00000636452 321 ntBASIC12.35□□□□□ -0.43
CD3DP04234 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD3DP04234 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CD3DP04234 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD3DP04234 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD3DP04234 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD3DP04234 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.35□□□□□ -0.43
CD3DP04234 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.35□□□□□ -0.43
CD3DP04234 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD3DP04234 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD3DP04234 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD3DP04234 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.35□□□□□ -0.43
CD3DP04234 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CD3DP04234 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
CD3DP04234 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD3DP04234 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.35□□□□□ -0.43
CD3DP04234 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CD3DP04234 DLX4-206ENST00000611342 1662 ntBASIC12.35□□□□□ -0.43
CD3DP04234 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD3DP04234 AL138725.1-201ENST00000407347 1314 ntBASIC12.35□□□□□ -0.43
CD3DP04234 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD3DP04234 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD3DP04234 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CD3DP04234 POM121L14P-201ENST00000406100 1558 ntBASIC12.35□□□□□ -0.43
CD3DP04234 AC009474.1-201ENST00000455096 1565 ntBASIC12.35□□□□□ -0.43
CD3DP04234 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
CD3DP04234 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CD3DP04234 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CD3DP04234 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.34□□□□□ -0.43
CD3DP04234 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.34□□□□□ -0.43
CD3DP04234 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CD3DP04234 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.34□□□□□ -0.43
CD3DP04234 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CD3DP04234 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.34□□□□□ -0.43
CD3DP04234 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
CD3DP04234 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
CD3DP04234 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
CD3DP04234 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.34□□□□□ -0.43
CD3DP04234 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.34□□□□□ -0.43
CD3DP04234 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.34□□□□□ -0.43
CD3DP04234 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.34□□□□□ -0.43
CD3DP04234 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.34□□□□□ -0.43
CD3DP04234 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.34□□□□□ -0.43
CD3DP04234 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.34□□□□□ -0.43
CD3DP04234 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.34□□□□□ -0.43
CD3DP04234 FAM86LP-201ENST00000478302 853 ntBASIC12.34□□□□□ -0.43
CD3DP04234 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.34□□□□□ -0.43
CD3DP04234 AC092865.5-201ENST00000545435 363 ntBASIC12.34□□□□□ -0.43
CD3DP04234 AL512356.2-201ENST00000546955 174 ntBASIC12.34□□□□□ -0.43
CD3DP04234 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.34□□□□□ -0.43
CD3DP04234 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.34□□□□□ -0.43
CD3DP04234 KRT18P8-201ENST00000581937 1246 ntBASIC12.34□□□□□ -0.43
CD3DP04234 MIR4469-201ENST00000583919 79 ntBASIC12.34□□□□□ -0.43
CD3DP04234 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.34□□□□□ -0.43
CD3DP04234 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.34□□□□□ -0.43
CD3DP04234 AC093813.1-201ENST00000605066 256 ntBASIC12.34□□□□□ -0.43
CD3DP04234 BAP1-211ENST00000615113 489 ntBASIC12.34□□□□□ -0.43
CD3DP04234 AP001002.3-201ENST00000623482 206 ntBASIC12.34□□□□□ -0.43
CD3DP04234 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
CD3DP04234 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 MIR193BHG-211ENST00000641433 5365 ntBASIC12.34□□□□□ -0.43
CD3DP04234 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
CD3DP04234 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.34□□□□□ -0.43
CD3DP04234 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms