Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.23□□□□□ -0.45
CD74P04233 KRT18P13-201ENST00000400056 1290 ntBASIC12.23□□□□□ -0.45
CD74P04233 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
CD74P04233 AL589987.1-201ENST00000453380 819 ntBASIC12.23□□□□□ -0.45
CD74P04233 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.23□□□□□ -0.45
CD74P04233 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.23□□□□□ -0.45
CD74P04233 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.23□□□□□ -0.45
CD74P04233 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.23□□□□□ -0.45
CD74P04233 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.23□□□□□ -0.45
CD74P04233 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CD74P04233 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.23□□□□□ -0.45
CD74P04233 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.23□□□□□ -0.45
CD74P04233 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 AC026271.4-201ENST00000578214 1833 ntBASIC12.23□□□□□ -0.45
CD74P04233 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
CD74P04233 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.23□□□□□ -0.45
CD74P04233 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CD74P04233 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CD74P04233 AL031719.1-201ENST00000623365 2587 ntBASIC12.23□□□□□ -0.45
CD74P04233 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
CD74P04233 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CD74P04233 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.22□□□□□ -0.45
CD74P04233 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.22□□□□□ -0.45
CD74P04233 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.22□□□□□ -0.45
CD74P04233 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CD74P04233 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.22□□□□□ -0.45
CD74P04233 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.22□□□□□ -0.45
CD74P04233 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CD74P04233 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.22□□□□□ -0.45
CD74P04233 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.22□□□□□ -0.45
CD74P04233 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.22□□□□□ -0.45
CD74P04233 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.22□□□□□ -0.45
CD74P04233 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.22□□□□□ -0.45
CD74P04233 DNAJB3-201ENST00000446806 729 ntBASIC12.22□□□□□ -0.45
CD74P04233 FO681548.1-201ENST00000455617 1132 ntBASIC12.22□□□□□ -0.45
CD74P04233 RN7SL399P-201ENST00000471648 279 ntBASIC12.22□□□□□ -0.45
CD74P04233 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.22□□□□□ -0.45
CD74P04233 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.22□□□□□ -0.45
CD74P04233 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.22□□□□□ -0.45
CD74P04233 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.22□□□□□ -0.45
CD74P04233 BRI3BPP1-201ENST00000594224 787 ntBASIC12.22□□□□□ -0.45
CD74P04233 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.22□□□□□ -0.45
CD74P04233 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.22□□□□□ -0.45
CD74P04233 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.22□□□□□ -0.45
CD74P04233 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CD74P04233 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.22□□□□□ -0.45
CD74P04233 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.22□□□□□ -0.45
CD74P04233 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
CD74P04233 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.22□□□□□ -0.45
CD74P04233 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CD74P04233 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.22□□□□□ -0.45
CD74P04233 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.22□□□□□ -0.45
CD74P04233 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CD74P04233 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.22□□□□□ -0.45
CD74P04233 LRRC59-203ENST00000576448 1531 ntBASIC12.21□□□□□ -0.45
CD74P04233 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.21□□□□□ -0.45
CD74P04233 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.21□□□□□ -0.45
CD74P04233 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD74P04233 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD74P04233 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD74P04233 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CD74P04233 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD74P04233 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.21□□□□□ -0.45
CD74P04233 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD74P04233 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
CD74P04233 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CD74P04233 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms