Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
VTNP04004 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
VTNP04004 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
VTNP04004 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VTNP04004 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.8■□□□□ 0.12
VTNP04004 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
VTNP04004 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
VTNP04004 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
VTNP04004 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
VTNP04004 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
VTNP04004 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
VTNP04004 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC15.8■□□□□ 0.12
VTNP04004 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
VTNP04004 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.8■□□□□ 0.12
VTNP04004 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
VTNP04004 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.8■□□□□ 0.12
VTNP04004 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
VTNP04004 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.8■□□□□ 0.12
VTNP04004 TPT1P11-201ENST00000458482 498 ntBASIC15.8■□□□□ 0.12
VTNP04004 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.8■□□□□ 0.12
VTNP04004 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
VTNP04004 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 AC104506.1-201ENST00000609247 429 ntBASIC15.8■□□□□ 0.12
VTNP04004 MIR6074-201ENST00000612054 107 ntBASIC15.8■□□□□ 0.12
VTNP04004 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 AC097359.2-201ENST00000604992 2389 ntBASIC15.8■□□□□ 0.12
VTNP04004 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.8■□□□□ 0.12
VTNP04004 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.8■□□□□ 0.12
VTNP04004 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
VTNP04004 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
VTNP04004 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VTNP04004 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
VTNP04004 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.8■□□□□ 0.12
VTNP04004 RN7SL832P-201ENST00000607781 1756 ntBASIC15.8■□□□□ 0.12
VTNP04004 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
VTNP04004 CCT8L1P-201ENST00000465400 1674 ntBASIC15.79■□□□□ 0.12
VTNP04004 AC106881.1-201ENST00000605849 3329 ntBASIC15.79■□□□□ 0.12
VTNP04004 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.79■□□□□ 0.12
VTNP04004 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.79■□□□□ 0.12
VTNP04004 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VTNP04004 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.79■□□□□ 0.12
VTNP04004 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.79■□□□□ 0.12
VTNP04004 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
VTNP04004 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.79■□□□□ 0.12
VTNP04004 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VTNP04004 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.79■□□□□ 0.12
VTNP04004 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VTNP04004 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VTNP04004 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
VTNP04004 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VTNP04004 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VTNP04004 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VTNP04004 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
VTNP04004 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VTNP04004 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VTNP04004 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.79■□□□□ 0.12
VTNP04004 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VTNP04004 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.79■□□□□ 0.12
VTNP04004 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VTNP04004 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.79■□□□□ 0.12
VTNP04004 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
VTNP04004 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.79■□□□□ 0.12
VTNP04004 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.79■□□□□ 0.12
VTNP04004 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC15.79■□□□□ 0.12
VTNP04004 MRPL22P1-201ENST00000505398 616 ntBASIC15.79■□□□□ 0.12
VTNP04004 AP002803.1-201ENST00000528836 498 ntBASIC15.79■□□□□ 0.12
VTNP04004 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.79■□□□□ 0.12
VTNP04004 NPM1P43-201ENST00000558669 786 ntBASIC15.79■□□□□ 0.12
VTNP04004 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
VTNP04004 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.79■□□□□ 0.12
VTNP04004 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
VTNP04004 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms