Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.41□□□□□ -0.58
ZNF253O75346 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 CLK3P2-201ENST00000427566 1453 ntBASIC11.41□□□□□ -0.58
ZNF253O75346 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
ZNF253O75346 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.41□□□□□ -0.58
ZNF253O75346 AL139094.1-201ENST00000405549 1188 ntBASIC11.41□□□□□ -0.58
ZNF253O75346 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.41□□□□□ -0.58
ZNF253O75346 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC11.41□□□□□ -0.58
ZNF253O75346 AC092580.3-201ENST00000430932 139 ntBASIC11.41□□□□□ -0.58
ZNF253O75346 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC11.41□□□□□ -0.58
ZNF253O75346 AC241585.1-201ENST00000433527 519 ntBASIC11.41□□□□□ -0.58
ZNF253O75346 AC009477.1-201ENST00000452936 217 ntBASIC11.41□□□□□ -0.58
ZNF253O75346 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 FAM86LP-201ENST00000478302 853 ntBASIC11.41□□□□□ -0.58
ZNF253O75346 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.41□□□□□ -0.58
ZNF253O75346 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.41□□□□□ -0.58
ZNF253O75346 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.41□□□□□ -0.58
ZNF253O75346 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.41□□□□□ -0.58
ZNF253O75346 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.41□□□□□ -0.58
ZNF253O75346 AL590560.3-201ENST00000623350 461 ntBASIC11.41□□□□□ -0.58
ZNF253O75346 AC134684.3-201ENST00000641758 218 ntBASIC11.41□□□□□ -0.58
ZNF253O75346 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
ZNF253O75346 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC11.41□□□□□ -0.58
ZNF253O75346 KRT8P14-201ENST00000414254 1442 ntBASIC11.41□□□□□ -0.58
ZNF253O75346 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.41□□□□□ -0.58
ZNF253O75346 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.41□□□□□ -0.58
ZNF253O75346 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
ZNF253O75346 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.41□□□□□ -0.58
ZNF253O75346 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.41□□□□□ -0.58
ZNF253O75346 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC11.41□□□□□ -0.58
ZNF253O75346 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
ZNF253O75346 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.4□□□□□ -0.58
ZNF253O75346 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.58
ZNF253O75346 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.4□□□□□ -0.58
ZNF253O75346 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
ZNF253O75346 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.4□□□□□ -0.58
ZNF253O75346 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
ZNF253O75346 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.4□□□□□ -0.58
ZNF253O75346 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.4□□□□□ -0.58
ZNF253O75346 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC11.4□□□□□ -0.58
ZNF253O75346 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
ZNF253O75346 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.4□□□□□ -0.58
ZNF253O75346 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
ZNF253O75346 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.4□□□□□ -0.58
ZNF253O75346 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 AC016397.2-201ENST00000624848 1985 ntBASIC11.4□□□□□ -0.58
ZNF253O75346 PCDHB18P-202ENST00000526308 3197 ntBASIC11.4□□□□□ -0.58
ZNF253O75346 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC11.4□□□□□ -0.58
ZNF253O75346 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.4□□□□□ -0.58
ZNF253O75346 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC11.4□□□□□ -0.58
ZNF253O75346 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.4□□□□□ -0.58
ZNF253O75346 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
ZNF253O75346 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.4□□□□□ -0.58
ZNF253O75346 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC11.4□□□□□ -0.58
ZNF253O75346 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
ZNF253O75346 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ZNF253O75346 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.4□□□□□ -0.58
ZNF253O75346 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC11.4□□□□□ -0.58
ZNF253O75346 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.4□□□□□ -0.58
ZNF253O75346 RRP7BP-205ENST00000566851 833 ntBASIC11.4□□□□□ -0.58
ZNF253O75346 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.4□□□□□ -0.58
ZNF253O75346 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.4□□□□□ -0.58
ZNF253O75346 LSM12-202ENST00000585388 942 ntTSL 3 BASIC11.4□□□□□ -0.58
ZNF253O75346 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC11.4□□□□□ -0.58
ZNF253O75346 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC11.4□□□□□ -0.58
ZNF253O75346 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms