Protein–RNA interactions for Protein: A2A2Y4

FRMD3, FERM domain-containing protein 3, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD3A2A2Y4 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 KRT18P36-201ENST00000411618 1276 ntBASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 AL591846.1-201ENST00000451736 433 ntBASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 AC005962.1-201ENST00000584100 773 ntBASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 AC022748.3-201ENST00000621828 275 ntBASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 KRT8P24-201ENST00000560290 1559 ntBASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 AC090643.2-201ENST00000623442 2029 ntBASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FRMD3A2A2Y4 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 AC011474.4-201ENST00000623523 2076 ntBASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 MBLAC2-202ENST00000514906 1936 ntBASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 KRT8P29-201ENST00000420409 1371 ntBASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 TUBB8P8-201ENST00000458717 1058 ntBASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 BNIP3P13-201ENST00000599968 566 ntBASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 AC005695.3-201ENST00000614522 232 ntBASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
FRMD3A2A2Y4 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FRMD3A2A2Y4 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FRMD3A2A2Y4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC16.05■□□□□ 0.16
FRMD3A2A2Y4 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FRMD3A2A2Y4 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms