Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PTPA-218ENST00000435132 618 ntTSL 2 BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AL591846.1-201ENST00000451736 433 ntBASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 OARD1-212ENST00000482515 832 ntTSL 2 BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 FTLP10-202ENST00000505798 471 ntBASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 RN7SL713P-201ENST00000582127 302 ntBASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 DIO1-215ENST00000610607 796 ntTSL 5 BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MBLAC2-202ENST00000514906 1936 ntBASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 KRT8P4-201ENST00000509735 1454 ntBASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 KRTAP10-13P-201ENST00000412914 571 ntBASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 POM121L8P-201ENST00000417732 1281 ntBASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 POM121L9P-203ENST00000441984 1285 ntBASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 RPSAP36-202ENST00000494591 1261 ntBASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AL391280.1-201ENST00000506969 1062 ntBASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ZACNP1-201ENST00000612259 710 ntBASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC005695.3-201ENST00000614522 232 ntBASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AL008638.5-201ENST00000623814 1298 ntBASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC244452.3-201ENST00000636814 210 ntBASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AL023775.1-201ENST00000454907 1746 ntBASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC016397.2-201ENST00000624848 1985 ntBASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms