Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 ENPP7P8-202ENST00000527856 1345 ntBASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 AP000244.1-201ENST00000424582 201 ntBASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 RN7SL128P-201ENST00000467883 305 ntBASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 HNRNPA1P56-201ENST00000505767 954 ntBASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 AC087203.1-201ENST00000532111 1181 ntBASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 HNRNPA1P5-201ENST00000558213 966 ntBASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 GOLGA8UP-201ENST00000527159 1755 ntBASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.09■□□□□ 0.49
LOC102724428A0A0B4J2F2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LOC102724428A0A0B4J2F2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LOC102724428A0A0B4J2F2 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC18.08■□□□□ 0.49
LOC102724428A0A0B4J2F2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
LOC102724428A0A0B4J2F2 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LOC102724428A0A0B4J2F2 SHMT1P1-201ENST00000419974 1312 ntBASIC18.08■□□□□ 0.49
LOC102724428A0A0B4J2F2 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC18.08■□□□□ 0.49
LOC102724428A0A0B4J2F2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 AC103592.1-201ENST00000394513 664 ntBASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 AC092570.1-201ENST00000414446 469 ntBASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 AL080243.1-201ENST00000423293 1060 ntBASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 RN7SL147P-201ENST00000487345 298 ntBASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 KNOP1P1-201ENST00000542108 989 ntBASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 AC132825.4-202ENST00000578792 434 ntBASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 RARS-210ENST00000626454 177 ntTSL 5 BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.08■□□□□ 0.48
LOC102724428A0A0B4J2F2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 AC008741.2-201ENST00000612792 3115 ntBASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 OR2W2P-201ENST00000406313 909 ntBASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 HNRNPA1P2-207ENST00000432375 960 ntBASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 AC092903.1-201ENST00000466506 262 ntBASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 AC005777.1-201ENST00000588332 187 ntBASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 AC005274.1-201ENST00000623460 802 ntBASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 AC073347.1-201ENST00000421633 2643 ntBASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LOC102724428A0A0B4J2F2 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms