Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 PCDHA3-202ENST00000532566 4594 ntBASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 AC006372.4-201ENST00000624122 1543 ntBASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.69□□□□□ -0.22
CCDC187A0A096LP49 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 OR8T1P-201ENST00000421347 918 ntBASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 LINC00634-202ENST00000505157 222 ntBASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 AC007326.2-201ENST00000624224 7579 ntBASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCDC187A0A096LP49 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 BRD7P5-201ENST00000299197 1822 ntBASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 GCSHP3-201ENST00000431120 391 ntBASIC13.67□□□□□ -0.22
CCDC187A0A096LP49 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms