Protein–RNA interactions for Protein: Q9Y6U7

RNF215, RING finger protein 215, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF215Q9Y6U7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF215Q9Y6U7 MIR939-201ENST00000401314 82 ntBASIC22.05■■□□□ 1.12
RNF215Q9Y6U7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.05■■□□□ 1.12
RNF215Q9Y6U7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
RNF215Q9Y6U7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RNF215Q9Y6U7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.05■■□□□ 1.12
RNF215Q9Y6U7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF215Q9Y6U7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF215Q9Y6U7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF215Q9Y6U7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF215Q9Y6U7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF215Q9Y6U7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.04■■□□□ 1.12
RNF215Q9Y6U7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF215Q9Y6U7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.04■■□□□ 1.12
RNF215Q9Y6U7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RNF215Q9Y6U7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF215Q9Y6U7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
RNF215Q9Y6U7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
RNF215Q9Y6U7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RNF215Q9Y6U7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF215Q9Y6U7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF215Q9Y6U7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.03■■□□□ 1.12
RNF215Q9Y6U7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF215Q9Y6U7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
RNF215Q9Y6U7 AC105265.2-201ENST00000467189 838 ntBASIC22.03■■□□□ 1.12
RNF215Q9Y6U7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.03■■□□□ 1.12
RNF215Q9Y6U7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF215Q9Y6U7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RNF215Q9Y6U7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
RNF215Q9Y6U7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RNF215Q9Y6U7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
RNF215Q9Y6U7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.02■■□□□ 1.12
RNF215Q9Y6U7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF215Q9Y6U7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RNF215Q9Y6U7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.02■■□□□ 1.12
RNF215Q9Y6U7 AL138724.1-201ENST00000606771 1088 ntBASIC22.02■■□□□ 1.12
RNF215Q9Y6U7 AC241377.3-202ENST00000626088 1088 ntBASIC22.02■■□□□ 1.12
RNF215Q9Y6U7 AC241585.3-202ENST00000628937 1088 ntBASIC22.02■■□□□ 1.12
RNF215Q9Y6U7 AC245100.8-202ENST00000629247 1058 ntBASIC22.02■■□□□ 1.12
RNF215Q9Y6U7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RNF215Q9Y6U7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RNF215Q9Y6U7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RNF215Q9Y6U7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
RNF215Q9Y6U7 ALDH1A3-203ENST00000557963 1670 ntBASIC22.01■■□□□ 1.11
RNF215Q9Y6U7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.01■■□□□ 1.11
RNF215Q9Y6U7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RNF215Q9Y6U7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF215Q9Y6U7 AC006455.2-201ENST00000429931 906 ntBASIC22.01■■□□□ 1.11
RNF215Q9Y6U7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.01■■□□□ 1.11
RNF215Q9Y6U7 RARRES2P6-201ENST00000567333 442 ntBASIC22.01■■□□□ 1.11
RNF215Q9Y6U7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.01■■□□□ 1.11
RNF215Q9Y6U7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.01■■□□□ 1.11
RNF215Q9Y6U7 AC011298.3-201ENST00000615796 283 ntBASIC22.01■■□□□ 1.11
RNF215Q9Y6U7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF215Q9Y6U7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.01■■□□□ 1.11
RNF215Q9Y6U7 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RNF215Q9Y6U7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RNF215Q9Y6U7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22■■□□□ 1.11
RNF215Q9Y6U7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF215Q9Y6U7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF215Q9Y6U7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF215Q9Y6U7 AC091305.1-201ENST00000479476 895 ntBASIC22■■□□□ 1.11
RNF215Q9Y6U7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22■■□□□ 1.11
RNF215Q9Y6U7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22■■□□□ 1.11
RNF215Q9Y6U7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RNF215Q9Y6U7 AP003733.4-201ENST00000623785 1697 ntBASIC22■■□□□ 1.11
RNF215Q9Y6U7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22■■□□□ 1.11
RNF215Q9Y6U7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF215Q9Y6U7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF215Q9Y6U7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.99■■□□□ 1.11
RNF215Q9Y6U7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF215Q9Y6U7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RNF215Q9Y6U7 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.99■■□□□ 1.11
RNF215Q9Y6U7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RNF215Q9Y6U7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF215Q9Y6U7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF215Q9Y6U7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
RNF215Q9Y6U7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RNF215Q9Y6U7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF215Q9Y6U7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.98■■□□□ 1.11
RNF215Q9Y6U7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.98■■□□□ 1.11
RNF215Q9Y6U7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RNF215Q9Y6U7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.98■■□□□ 1.11
RNF215Q9Y6U7 AC009086.3-201ENST00000623486 1008 ntBASIC21.98■■□□□ 1.11
RNF215Q9Y6U7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RNF215Q9Y6U7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF215Q9Y6U7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF215Q9Y6U7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF215Q9Y6U7 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF215Q9Y6U7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF215Q9Y6U7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.97■■□□□ 1.11
RNF215Q9Y6U7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.97■■□□□ 1.11
RNF215Q9Y6U7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF215Q9Y6U7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RNF215Q9Y6U7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF215Q9Y6U7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RNF215Q9Y6U7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RNF215Q9Y6U7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF215Q9Y6U7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RNF215Q9Y6U7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms