Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.24■■□□□ 1.63
SCN10AQ9Y5Y9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SCN10AQ9Y5Y9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SCN10AQ9Y5Y9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.23■■□□□ 1.63
SCN10AQ9Y5Y9 AC145676.1-201ENST00000514988 2004 ntBASIC25.23■■□□□ 1.63
SCN10AQ9Y5Y9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.23■■□□□ 1.63
SCN10AQ9Y5Y9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SCN10AQ9Y5Y9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SCN10AQ9Y5Y9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SCN10AQ9Y5Y9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.23■■□□□ 1.63
SCN10AQ9Y5Y9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SCN10AQ9Y5Y9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SCN10AQ9Y5Y9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SCN10AQ9Y5Y9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SCN10AQ9Y5Y9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.22■■□□□ 1.63
SCN10AQ9Y5Y9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
SCN10AQ9Y5Y9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SCN10AQ9Y5Y9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.21■■□□□ 1.63
SCN10AQ9Y5Y9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.21■■□□□ 1.63
SCN10AQ9Y5Y9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.21■■□□□ 1.63
SCN10AQ9Y5Y9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.21■■□□□ 1.63
SCN10AQ9Y5Y9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.21■■□□□ 1.63
SCN10AQ9Y5Y9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SCN10AQ9Y5Y9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.2■■□□□ 1.63
SCN10AQ9Y5Y9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.2■■□□□ 1.63
SCN10AQ9Y5Y9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
SCN10AQ9Y5Y9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.2■■□□□ 1.63
SCN10AQ9Y5Y9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.2■■□□□ 1.63
SCN10AQ9Y5Y9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.2■■□□□ 1.62
SCN10AQ9Y5Y9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SCN10AQ9Y5Y9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.2■■□□□ 1.62
SCN10AQ9Y5Y9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SCN10AQ9Y5Y9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SCN10AQ9Y5Y9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
SCN10AQ9Y5Y9 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.19■■□□□ 1.62
SCN10AQ9Y5Y9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
SCN10AQ9Y5Y9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
SCN10AQ9Y5Y9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SCN10AQ9Y5Y9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 AL031602.1-201ENST00000633169 911 ntBASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 HLA-L-211ENST00000482052 1765 ntBASIC25.18■■□□□ 1.62
SCN10AQ9Y5Y9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SCN10AQ9Y5Y9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
SCN10AQ9Y5Y9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.17■■□□□ 1.62
SCN10AQ9Y5Y9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.17■■□□□ 1.62
SCN10AQ9Y5Y9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.17■■□□□ 1.62
SCN10AQ9Y5Y9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SCN10AQ9Y5Y9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.17■■□□□ 1.62
SCN10AQ9Y5Y9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SCN10AQ9Y5Y9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SCN10AQ9Y5Y9 AC027612.3-201ENST00000413684 1047 ntBASIC25.16■■□□□ 1.62
SCN10AQ9Y5Y9 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.16■■□□□ 1.62
SCN10AQ9Y5Y9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.16■■□□□ 1.62
SCN10AQ9Y5Y9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SCN10AQ9Y5Y9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SCN10AQ9Y5Y9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.15■■□□□ 1.62
SCN10AQ9Y5Y9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
SCN10AQ9Y5Y9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
SCN10AQ9Y5Y9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCN10AQ9Y5Y9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCN10AQ9Y5Y9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SCN10AQ9Y5Y9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.15■■□□□ 1.62
SCN10AQ9Y5Y9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
SCN10AQ9Y5Y9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
SCN10AQ9Y5Y9 ALDH1A3-203ENST00000557963 1670 ntBASIC25.15■■□□□ 1.62
SCN10AQ9Y5Y9 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.14■■□□□ 1.62
SCN10AQ9Y5Y9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.14■■□□□ 1.62
SCN10AQ9Y5Y9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
SCN10AQ9Y5Y9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SCN10AQ9Y5Y9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SCN10AQ9Y5Y9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SCN10AQ9Y5Y9 pRNA.6-201ENST00000610482 90 ntBASIC25.13■■□□□ 1.61
SCN10AQ9Y5Y9 pRNA.5-201ENST00000612139 90 ntBASIC25.13■■□□□ 1.61
SCN10AQ9Y5Y9 pRNA.11-201ENST00000618423 90 ntBASIC25.13■■□□□ 1.61
SCN10AQ9Y5Y9 pRNA.13-201ENST00000619112 90 ntBASIC25.13■■□□□ 1.61
SCN10AQ9Y5Y9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCN10AQ9Y5Y9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCN10AQ9Y5Y9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SCN10AQ9Y5Y9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
SCN10AQ9Y5Y9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
SCN10AQ9Y5Y9 AC126544.1-201ENST00000580842 1059 ntBASIC25.12■■□□□ 1.61
SCN10AQ9Y5Y9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCN10AQ9Y5Y9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCN10AQ9Y5Y9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCN10AQ9Y5Y9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms