Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 ANOS2P-203ENST00000472227 1816 ntBASIC21.84■■□□□ 1.09
PCDHA9Q9Y5H5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA9Q9Y5H5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
PCDHA9Q9Y5H5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.83■■□□□ 1.09
PCDHA9Q9Y5H5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHA9Q9Y5H5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA9Q9Y5H5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA9Q9Y5H5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA9Q9Y5H5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.83■■□□□ 1.09
PCDHA9Q9Y5H5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.83■■□□□ 1.09
PCDHA9Q9Y5H5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHA9Q9Y5H5 AC233723.2-201ENST00000623798 2106 ntBASIC21.83■■□□□ 1.08
PCDHA9Q9Y5H5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHA9Q9Y5H5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHA9Q9Y5H5 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHA9Q9Y5H5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA9Q9Y5H5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA9Q9Y5H5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA9Q9Y5H5 AC103724.3-201ENST00000564481 992 ntBASIC21.82■■□□□ 1.08
PCDHA9Q9Y5H5 MIR4281-201ENST00000580852 62 ntBASIC21.82■■□□□ 1.08
PCDHA9Q9Y5H5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PCDHA9Q9Y5H5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA9Q9Y5H5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA9Q9Y5H5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA9Q9Y5H5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA9Q9Y5H5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHA9Q9Y5H5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.81■■□□□ 1.08
PCDHA9Q9Y5H5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA9Q9Y5H5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHA9Q9Y5H5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA9Q9Y5H5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA9Q9Y5H5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHA9Q9Y5H5 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA9Q9Y5H5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHA9Q9Y5H5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA9Q9Y5H5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA9Q9Y5H5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHA9Q9Y5H5 AL161729.1-201ENST00000604104 1402 ntBASIC21.8■■□□□ 1.08
PCDHA9Q9Y5H5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHA9Q9Y5H5 DUSP8P3-201ENST00000399571 1760 ntBASIC21.79■■□□□ 1.08
PCDHA9Q9Y5H5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA9Q9Y5H5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
PCDHA9Q9Y5H5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA9Q9Y5H5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHA9Q9Y5H5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHA9Q9Y5H5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA9Q9Y5H5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHA9Q9Y5H5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PCDHA9Q9Y5H5 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHA9Q9Y5H5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHA9Q9Y5H5 AC092068.2-201ENST00000590491 1708 ntBASIC21.78■■□□□ 1.08
PCDHA9Q9Y5H5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHA9Q9Y5H5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.78■■□□□ 1.08
PCDHA9Q9Y5H5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHA9Q9Y5H5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHA9Q9Y5H5 EP400NL-214ENST00000641289 2402 ntBASIC21.78■■□□□ 1.08
PCDHA9Q9Y5H5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHA9Q9Y5H5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PCDHA9Q9Y5H5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 AF131216.4-201ENST00000638924 1588 ntBASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA9Q9Y5H5 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
PCDHA9Q9Y5H5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.77■■□□□ 1.07
PCDHA9Q9Y5H5 AL022069.1-201ENST00000568025 1636 ntBASIC21.77■■□□□ 1.07
PCDHA9Q9Y5H5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHA9Q9Y5H5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA9Q9Y5H5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA9Q9Y5H5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA9Q9Y5H5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PCDHA9Q9Y5H5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA9Q9Y5H5 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PCDHA9Q9Y5H5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA9Q9Y5H5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PCDHA9Q9Y5H5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA9Q9Y5H5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCDHA9Q9Y5H5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHA9Q9Y5H5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PCDHA9Q9Y5H5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA9Q9Y5H5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA9Q9Y5H5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA9Q9Y5H5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA9Q9Y5H5 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHA9Q9Y5H5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA9Q9Y5H5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHA9Q9Y5H5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms