Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA11Q9Y5H2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
PCDHGA11Q9Y5H2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHGA11Q9Y5H2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA11Q9Y5H2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA11Q9Y5H2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA11Q9Y5H2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA11Q9Y5H2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA11Q9Y5H2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGA11Q9Y5H2 AC137630.3-201ENST00000607245 391 ntBASIC21.94■■□□□ 1.1
PCDHGA11Q9Y5H2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA11Q9Y5H2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA11Q9Y5H2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHGA11Q9Y5H2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGA11Q9Y5H2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA11Q9Y5H2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA11Q9Y5H2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PCDHGA11Q9Y5H2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA11Q9Y5H2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGA11Q9Y5H2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PCDHGA11Q9Y5H2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA11Q9Y5H2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA11Q9Y5H2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.93■■□□□ 1.1
PCDHGA11Q9Y5H2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.93■■□□□ 1.1
PCDHGA11Q9Y5H2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGA11Q9Y5H2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PCDHGA11Q9Y5H2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHGA11Q9Y5H2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA11Q9Y5H2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGA11Q9Y5H2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA11Q9Y5H2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA11Q9Y5H2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA11Q9Y5H2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA11Q9Y5H2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGA11Q9Y5H2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PCDHGA11Q9Y5H2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA11Q9Y5H2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA11Q9Y5H2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHGA11Q9Y5H2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHGA11Q9Y5H2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHGA11Q9Y5H2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PCDHGA11Q9Y5H2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA11Q9Y5H2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHGA11Q9Y5H2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA11Q9Y5H2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGA11Q9Y5H2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGA11Q9Y5H2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGA11Q9Y5H2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PCDHGA11Q9Y5H2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.89■■□□□ 1.09
PCDHGA11Q9Y5H2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHGA11Q9Y5H2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
PCDHGA11Q9Y5H2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA11Q9Y5H2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGA11Q9Y5H2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA11Q9Y5H2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA11Q9Y5H2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA11Q9Y5H2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGA11Q9Y5H2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
PCDHGA11Q9Y5H2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.88■■□□□ 1.09
PCDHGA11Q9Y5H2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA11Q9Y5H2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA11Q9Y5H2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA11Q9Y5H2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA11Q9Y5H2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA11Q9Y5H2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGA11Q9Y5H2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGA11Q9Y5H2 CLDN5-201ENST00000403084 2357 ntBASIC21.88■■□□□ 1.09
PCDHGA11Q9Y5H2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA11Q9Y5H2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA11Q9Y5H2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA11Q9Y5H2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA11Q9Y5H2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.87■■□□□ 1.09
PCDHGA11Q9Y5H2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHGA11Q9Y5H2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA11Q9Y5H2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGA11Q9Y5H2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 BX664725.1-201ENST00000438252 379 ntBASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGA11Q9Y5H2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA11Q9Y5H2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHGA11Q9Y5H2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA11Q9Y5H2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA11Q9Y5H2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGA11Q9Y5H2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.85■■□□□ 1.09
PCDHGA11Q9Y5H2 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms