Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.19■■□□□ 1.78
PTPN22Q9Y2R2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC26.19■■□□□ 1.78
PTPN22Q9Y2R2 ABHD17AP1-201ENST00000358206 933 ntBASIC26.19■■□□□ 1.78
PTPN22Q9Y2R2 CCDC92B-201ENST00000575506 885 ntBASIC26.19■■□□□ 1.78
PTPN22Q9Y2R2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.19■■□□□ 1.78
PTPN22Q9Y2R2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
PTPN22Q9Y2R2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PTPN22Q9Y2R2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
PTPN22Q9Y2R2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PTPN22Q9Y2R2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.18■■□□□ 1.78
PTPN22Q9Y2R2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
PTPN22Q9Y2R2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.18■■□□□ 1.78
PTPN22Q9Y2R2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PTPN22Q9Y2R2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PTPN22Q9Y2R2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PTPN22Q9Y2R2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
PTPN22Q9Y2R2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PTPN22Q9Y2R2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PTPN22Q9Y2R2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.17■■□□□ 1.78
PTPN22Q9Y2R2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PTPN22Q9Y2R2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
PTPN22Q9Y2R2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PTPN22Q9Y2R2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PTPN22Q9Y2R2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PTPN22Q9Y2R2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.16■■□□□ 1.78
PTPN22Q9Y2R2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PTPN22Q9Y2R2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
PTPN22Q9Y2R2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
PTPN22Q9Y2R2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PTPN22Q9Y2R2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC26.15■■□□□ 1.78
PTPN22Q9Y2R2 MIR6084-201ENST00000622012 110 ntBASIC26.15■■□□□ 1.78
PTPN22Q9Y2R2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PTPN22Q9Y2R2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PTPN22Q9Y2R2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PTPN22Q9Y2R2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PTPN22Q9Y2R2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PTPN22Q9Y2R2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC26.14■■□□□ 1.78
PTPN22Q9Y2R2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC26.14■■□□□ 1.78
PTPN22Q9Y2R2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
PTPN22Q9Y2R2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PTPN22Q9Y2R2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
PTPN22Q9Y2R2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PTPN22Q9Y2R2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.13■■□□□ 1.77
PTPN22Q9Y2R2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.13■■□□□ 1.77
PTPN22Q9Y2R2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
PTPN22Q9Y2R2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PTPN22Q9Y2R2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.13■■□□□ 1.77
PTPN22Q9Y2R2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PTPN22Q9Y2R2 AC009086.3-201ENST00000623486 1008 ntBASIC26.13■■□□□ 1.77
PTPN22Q9Y2R2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
PTPN22Q9Y2R2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC26.12■■□□□ 1.77
PTPN22Q9Y2R2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.12■■□□□ 1.77
PTPN22Q9Y2R2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.12■■□□□ 1.77
PTPN22Q9Y2R2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PTPN22Q9Y2R2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
PTPN22Q9Y2R2 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTPN22Q9Y2R2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTPN22Q9Y2R2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTPN22Q9Y2R2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PTPN22Q9Y2R2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC26.11■■□□□ 1.77
PTPN22Q9Y2R2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.11■■□□□ 1.77
PTPN22Q9Y2R2 KRT18P14-201ENST00000534205 1250 ntBASIC26.11■■□□□ 1.77
PTPN22Q9Y2R2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.11■■□□□ 1.77
PTPN22Q9Y2R2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC26.11■■□□□ 1.77
PTPN22Q9Y2R2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC26.1■■□□□ 1.77
PTPN22Q9Y2R2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.1■■□□□ 1.77
PTPN22Q9Y2R2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.1■■□□□ 1.77
PTPN22Q9Y2R2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.09■■□□□ 1.77
PTPN22Q9Y2R2 AC012414.1-201ENST00000556676 535 ntBASIC26.09■■□□□ 1.77
PTPN22Q9Y2R2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.09■■□□□ 1.77
PTPN22Q9Y2R2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.09■■□□□ 1.77
PTPN22Q9Y2R2 AC080038.1-201ENST00000611274 1154 ntBASIC26.09■■□□□ 1.77
PTPN22Q9Y2R2 GXYLT1P5-201ENST00000614548 1189 ntBASIC26.09■■□□□ 1.77
PTPN22Q9Y2R2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
PTPN22Q9Y2R2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.09■■□□□ 1.77
PTPN22Q9Y2R2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PTPN22Q9Y2R2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
PTPN22Q9Y2R2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.08■■□□□ 1.77
PTPN22Q9Y2R2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PTPN22Q9Y2R2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
PTPN22Q9Y2R2 MIR572-201ENST00000384983 95 ntBASIC26.08■■□□□ 1.77
PTPN22Q9Y2R2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC26.08■■□□□ 1.77
PTPN22Q9Y2R2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PTPN22Q9Y2R2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
PTPN22Q9Y2R2 AC131274.2-201ENST00000580697 1507 ntBASIC26.08■■□□□ 1.77
PTPN22Q9Y2R2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.08■■□□□ 1.76
PTPN22Q9Y2R2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PTPN22Q9Y2R2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
PTPN22Q9Y2R2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PTPN22Q9Y2R2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.07■■□□□ 1.76
PTPN22Q9Y2R2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.07■■□□□ 1.76
PTPN22Q9Y2R2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.07■■□□□ 1.76
PTPN22Q9Y2R2 AL354811.1-201ENST00000610286 706 ntBASIC26.07■■□□□ 1.76
PTPN22Q9Y2R2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.07■■□□□ 1.76
PTPN22Q9Y2R2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PTPN22Q9Y2R2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PTPN22Q9Y2R2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.06■■□□□ 1.76
PTPN22Q9Y2R2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.06■■□□□ 1.76
PTPN22Q9Y2R2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PTPN22Q9Y2R2 TERF1P2-201ENST00000583350 1212 ntBASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms