Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC31.37■■■□□ 2.61
PHF8Q9UPP1 SLC47A1P1-202ENST00000449666 945 ntBASIC31.37■■■□□ 2.61
PHF8Q9UPP1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC31.37■■■□□ 2.61
PHF8Q9UPP1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC31.37■■■□□ 2.61
PHF8Q9UPP1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC31.37■■■□□ 2.61
PHF8Q9UPP1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PHF8Q9UPP1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
PHF8Q9UPP1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PHF8Q9UPP1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
PHF8Q9UPP1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.36■■■□□ 2.61
PHF8Q9UPP1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PHF8Q9UPP1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC31.36■■■□□ 2.61
PHF8Q9UPP1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC31.36■■■□□ 2.61
PHF8Q9UPP1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PHF8Q9UPP1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC31.36■■■□□ 2.61
PHF8Q9UPP1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PHF8Q9UPP1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC31.36■■■□□ 2.61
PHF8Q9UPP1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC31.36■■■□□ 2.61
PHF8Q9UPP1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PHF8Q9UPP1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
PHF8Q9UPP1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC31.35■■■□□ 2.61
PHF8Q9UPP1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC31.35■■■□□ 2.61
PHF8Q9UPP1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
PHF8Q9UPP1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
PHF8Q9UPP1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PHF8Q9UPP1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
PHF8Q9UPP1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PHF8Q9UPP1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC31.34■■■□□ 2.61
PHF8Q9UPP1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
PHF8Q9UPP1 AC027612.3-201ENST00000413684 1047 ntBASIC31.34■■■□□ 2.61
PHF8Q9UPP1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PHF8Q9UPP1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC31.34■■■□□ 2.61
PHF8Q9UPP1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
PHF8Q9UPP1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC31.34■■■□□ 2.61
PHF8Q9UPP1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PHF8Q9UPP1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC31.33■■■□□ 2.61
PHF8Q9UPP1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PHF8Q9UPP1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PHF8Q9UPP1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PHF8Q9UPP1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC31.33■■■□□ 2.61
PHF8Q9UPP1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PHF8Q9UPP1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC31.33■■■□□ 2.61
PHF8Q9UPP1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.61
PHF8Q9UPP1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC31.32■■■□□ 2.6
PHF8Q9UPP1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PHF8Q9UPP1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC31.32■■■□□ 2.6
PHF8Q9UPP1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PHF8Q9UPP1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
PHF8Q9UPP1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC31.31■■■□□ 2.6
PHF8Q9UPP1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PHF8Q9UPP1 AC123595.1-201ENST00000440769 1046 ntBASIC31.31■■■□□ 2.6
PHF8Q9UPP1 AL358852.1-201ENST00000623174 1268 ntBASIC31.31■■■□□ 2.6
PHF8Q9UPP1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PHF8Q9UPP1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PHF8Q9UPP1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC31.3■■■□□ 2.6
PHF8Q9UPP1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC31.3■■■□□ 2.6
PHF8Q9UPP1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
PHF8Q9UPP1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC31.3■■■□□ 2.6
PHF8Q9UPP1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC31.3■■■□□ 2.6
PHF8Q9UPP1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC31.3■■■□□ 2.6
PHF8Q9UPP1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC31.3■■■□□ 2.6
PHF8Q9UPP1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC31.3■■■□□ 2.6
PHF8Q9UPP1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
PHF8Q9UPP1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
PHF8Q9UPP1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
PHF8Q9UPP1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
PHF8Q9UPP1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PHF8Q9UPP1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
PHF8Q9UPP1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC31.29■■■□□ 2.6
PHF8Q9UPP1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PHF8Q9UPP1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC31.28■■■□□ 2.6
PHF8Q9UPP1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC31.28■■■□□ 2.6
PHF8Q9UPP1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
PHF8Q9UPP1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC31.27■■■□□ 2.6
PHF8Q9UPP1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
PHF8Q9UPP1 AC004911.1-201ENST00000416316 871 ntBASIC31.27■■■□□ 2.6
PHF8Q9UPP1 MIR6084-201ENST00000622012 110 ntBASIC31.27■■■□□ 2.6
PHF8Q9UPP1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PHF8Q9UPP1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
PHF8Q9UPP1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
PHF8Q9UPP1 IGHV3-19-201ENST00000521488 291 ntBASIC31.26■■■□□ 2.59
PHF8Q9UPP1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC31.26■■■□□ 2.59
PHF8Q9UPP1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.26■■■□□ 2.59
PHF8Q9UPP1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PHF8Q9UPP1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC31.26■■■□□ 2.59
PHF8Q9UPP1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
PHF8Q9UPP1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PHF8Q9UPP1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
PHF8Q9UPP1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC31.25■■■□□ 2.59
PHF8Q9UPP1 MIR572-201ENST00000384983 95 ntBASIC31.25■■■□□ 2.59
PHF8Q9UPP1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
PHF8Q9UPP1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC31.24■■■□□ 2.59
PHF8Q9UPP1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PHF8Q9UPP1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PHF8Q9UPP1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC31.24■■■□□ 2.59
PHF8Q9UPP1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC31.24■■■□□ 2.59
PHF8Q9UPP1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC31.24■■■□□ 2.59
PHF8Q9UPP1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC31.24■■■□□ 2.59
PHF8Q9UPP1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
PHF8Q9UPP1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms