Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP50Q9UKX7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP50Q9UKX7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP50Q9UKX7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP50Q9UKX7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NUP50Q9UKX7 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.62■□□□□ 0.73
NUP50Q9UKX7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.62■□□□□ 0.73
NUP50Q9UKX7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NUP50Q9UKX7 AC137767.1-201ENST00000602918 1920 ntBASIC19.62■□□□□ 0.73
NUP50Q9UKX7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP50Q9UKX7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP50Q9UKX7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUP50Q9UKX7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUP50Q9UKX7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NUP50Q9UKX7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
NUP50Q9UKX7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.61■□□□□ 0.73
NUP50Q9UKX7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.61■□□□□ 0.73
NUP50Q9UKX7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
NUP50Q9UKX7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
NUP50Q9UKX7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.6■□□□□ 0.73
NUP50Q9UKX7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NUP50Q9UKX7 LINC01124-201ENST00000409786 2117 ntBASIC19.6■□□□□ 0.73
NUP50Q9UKX7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NUP50Q9UKX7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP50Q9UKX7 EP400NL-214ENST00000641289 2402 ntBASIC19.6■□□□□ 0.73
NUP50Q9UKX7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP50Q9UKX7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NUP50Q9UKX7 GUSBP5-201ENST00000418136 578 ntBASIC19.6■□□□□ 0.73
NUP50Q9UKX7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NUP50Q9UKX7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP50Q9UKX7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP50Q9UKX7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP50Q9UKX7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP50Q9UKX7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUP50Q9UKX7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.6■□□□□ 0.73
NUP50Q9UKX7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.6■□□□□ 0.73
NUP50Q9UKX7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NUP50Q9UKX7 AC010501.1-201ENST00000606270 1962 ntBASIC19.59■□□□□ 0.73
NUP50Q9UKX7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP50Q9UKX7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NUP50Q9UKX7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.59■□□□□ 0.73
NUP50Q9UKX7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.59■□□□□ 0.73
NUP50Q9UKX7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.59■□□□□ 0.73
NUP50Q9UKX7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.59■□□□□ 0.73
NUP50Q9UKX7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NUP50Q9UKX7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NUP50Q9UKX7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NUP50Q9UKX7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NUP50Q9UKX7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NUP50Q9UKX7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NUP50Q9UKX7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP50Q9UKX7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP50Q9UKX7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP50Q9UKX7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUP50Q9UKX7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NUP50Q9UKX7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
NUP50Q9UKX7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NUP50Q9UKX7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NUP50Q9UKX7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUP50Q9UKX7 AC022616.5-201ENST00000518796 181 ntBASIC19.58■□□□□ 0.72
NUP50Q9UKX7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.58■□□□□ 0.72
NUP50Q9UKX7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
NUP50Q9UKX7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUP50Q9UKX7 AC022211.4-201ENST00000625094 2161 ntBASIC19.58■□□□□ 0.72
NUP50Q9UKX7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NUP50Q9UKX7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NUP50Q9UKX7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NUP50Q9UKX7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NUP50Q9UKX7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.57■□□□□ 0.72
NUP50Q9UKX7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUP50Q9UKX7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NUP50Q9UKX7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUP50Q9UKX7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.57■□□□□ 0.72
NUP50Q9UKX7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
NUP50Q9UKX7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUP50Q9UKX7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NUP50Q9UKX7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUP50Q9UKX7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.57■□□□□ 0.72
NUP50Q9UKX7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUP50Q9UKX7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NUP50Q9UKX7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.56■□□□□ 0.72
NUP50Q9UKX7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
NUP50Q9UKX7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUP50Q9UKX7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NUP50Q9UKX7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NUP50Q9UKX7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.56■□□□□ 0.72
NUP50Q9UKX7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.56■□□□□ 0.72
NUP50Q9UKX7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.56■□□□□ 0.72
NUP50Q9UKX7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUP50Q9UKX7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
NUP50Q9UKX7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.56■□□□□ 0.72
NUP50Q9UKX7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NUP50Q9UKX7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUP50Q9UKX7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NUP50Q9UKX7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.55■□□□□ 0.72
NUP50Q9UKX7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUP50Q9UKX7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUP50Q9UKX7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NUP50Q9UKX7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NUP50Q9UKX7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms