Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.89■■□□□ 1.09
NDE1Q9NXR1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NDE1Q9NXR1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
NDE1Q9NXR1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
NDE1Q9NXR1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
NDE1Q9NXR1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
NDE1Q9NXR1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NDE1Q9NXR1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
NDE1Q9NXR1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NDE1Q9NXR1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.89■■□□□ 1.09
NDE1Q9NXR1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
NDE1Q9NXR1 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NDE1Q9NXR1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NDE1Q9NXR1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NDE1Q9NXR1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.88■■□□□ 1.09
NDE1Q9NXR1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NDE1Q9NXR1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NDE1Q9NXR1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.88■■□□□ 1.09
NDE1Q9NXR1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
NDE1Q9NXR1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NDE1Q9NXR1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NDE1Q9NXR1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.88■■□□□ 1.09
NDE1Q9NXR1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NDE1Q9NXR1 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.87■■□□□ 1.09
NDE1Q9NXR1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
NDE1Q9NXR1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NDE1Q9NXR1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
NDE1Q9NXR1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NDE1Q9NXR1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.87■■□□□ 1.09
NDE1Q9NXR1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.87■■□□□ 1.09
NDE1Q9NXR1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.87■■□□□ 1.09
NDE1Q9NXR1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NDE1Q9NXR1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
NDE1Q9NXR1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NDE1Q9NXR1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.86■■□□□ 1.09
NDE1Q9NXR1 AL137060.1-201ENST00000618151 2648 ntBASIC21.86■■□□□ 1.09
NDE1Q9NXR1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
NDE1Q9NXR1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NDE1Q9NXR1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NDE1Q9NXR1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
NDE1Q9NXR1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NDE1Q9NXR1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.85■■□□□ 1.09
NDE1Q9NXR1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.85■■□□□ 1.09
NDE1Q9NXR1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NDE1Q9NXR1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NDE1Q9NXR1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.85■■□□□ 1.09
NDE1Q9NXR1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NDE1Q9NXR1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
NDE1Q9NXR1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NDE1Q9NXR1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
NDE1Q9NXR1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NDE1Q9NXR1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NDE1Q9NXR1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
NDE1Q9NXR1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
NDE1Q9NXR1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NDE1Q9NXR1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.84■■□□□ 1.09
NDE1Q9NXR1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.84■■□□□ 1.09
NDE1Q9NXR1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NDE1Q9NXR1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NDE1Q9NXR1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NDE1Q9NXR1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
NDE1Q9NXR1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
NDE1Q9NXR1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NDE1Q9NXR1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NDE1Q9NXR1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.83■■□□□ 1.09
NDE1Q9NXR1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NDE1Q9NXR1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.08
NDE1Q9NXR1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.83■■□□□ 1.08
NDE1Q9NXR1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.82■■□□□ 1.08
NDE1Q9NXR1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.82■■□□□ 1.08
NDE1Q9NXR1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NDE1Q9NXR1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
NDE1Q9NXR1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NDE1Q9NXR1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NDE1Q9NXR1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NDE1Q9NXR1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.82■■□□□ 1.08
NDE1Q9NXR1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.82■■□□□ 1.08
NDE1Q9NXR1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
NDE1Q9NXR1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NDE1Q9NXR1 RP9P-202ENST00000450133 1212 ntBASIC21.82■■□□□ 1.08
NDE1Q9NXR1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NDE1Q9NXR1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.81■■□□□ 1.08
NDE1Q9NXR1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.81■■□□□ 1.08
NDE1Q9NXR1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NDE1Q9NXR1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NDE1Q9NXR1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
NDE1Q9NXR1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NDE1Q9NXR1 CR559946.2-201ENST00000623684 991 ntBASIC21.81■■□□□ 1.08
NDE1Q9NXR1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NDE1Q9NXR1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.81■■□□□ 1.08
NDE1Q9NXR1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NDE1Q9NXR1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NDE1Q9NXR1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NDE1Q9NXR1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NDE1Q9NXR1 ESRRAP2-201ENST00000418437 1549 ntBASIC21.8■■□□□ 1.08
NDE1Q9NXR1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDE1Q9NXR1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NDE1Q9NXR1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
NDE1Q9NXR1 AC242852.2-201ENST00000615738 1807 ntBASIC21.8■■□□□ 1.08
NDE1Q9NXR1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms