Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PCDHB16Q9NRJ7 AL022069.1-201ENST00000568025 1636 ntBASIC19.54■□□□□ 0.72
PCDHB16Q9NRJ7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHB16Q9NRJ7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHB16Q9NRJ7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
PCDHB16Q9NRJ7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB16Q9NRJ7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHB16Q9NRJ7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB16Q9NRJ7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB16Q9NRJ7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB16Q9NRJ7 DUX4L9-201ENST00000449051 1259 ntBASIC19.53■□□□□ 0.72
PCDHB16Q9NRJ7 SPCS2P3-201ENST00000500401 656 ntBASIC19.53■□□□□ 0.72
PCDHB16Q9NRJ7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHB16Q9NRJ7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PCDHB16Q9NRJ7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PCDHB16Q9NRJ7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHB16Q9NRJ7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB16Q9NRJ7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHB16Q9NRJ7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCDHB16Q9NRJ7 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB16Q9NRJ7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB16Q9NRJ7 LONRF2P2-201ENST00000439212 571 ntBASIC19.52■□□□□ 0.72
PCDHB16Q9NRJ7 AC022616.5-201ENST00000518796 181 ntBASIC19.52■□□□□ 0.72
PCDHB16Q9NRJ7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHB16Q9NRJ7 AC011551.1-201ENST00000614101 683 ntBASIC19.52■□□□□ 0.72
PCDHB16Q9NRJ7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCDHB16Q9NRJ7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB16Q9NRJ7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHB16Q9NRJ7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PCDHB16Q9NRJ7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.52■□□□□ 0.71
PCDHB16Q9NRJ7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB16Q9NRJ7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB16Q9NRJ7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHB16Q9NRJ7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
PCDHB16Q9NRJ7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB16Q9NRJ7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PCDHB16Q9NRJ7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB16Q9NRJ7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB16Q9NRJ7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB16Q9NRJ7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB16Q9NRJ7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB16Q9NRJ7 C9orf163-202ENST00000624034 2573 ntBASIC19.51■□□□□ 0.71
PCDHB16Q9NRJ7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB16Q9NRJ7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PCDHB16Q9NRJ7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHB16Q9NRJ7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHB16Q9NRJ7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
PCDHB16Q9NRJ7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB16Q9NRJ7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB16Q9NRJ7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.5■□□□□ 0.71
PCDHB16Q9NRJ7 NTF6A-201ENST00000591175 560 ntBASIC19.5■□□□□ 0.71
PCDHB16Q9NRJ7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB16Q9NRJ7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB16Q9NRJ7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PCDHB16Q9NRJ7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHB16Q9NRJ7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PCDHB16Q9NRJ7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
PCDHB16Q9NRJ7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB16Q9NRJ7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHB16Q9NRJ7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHB16Q9NRJ7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHB16Q9NRJ7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB16Q9NRJ7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB16Q9NRJ7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB16Q9NRJ7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB16Q9NRJ7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHB16Q9NRJ7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB16Q9NRJ7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB16Q9NRJ7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB16Q9NRJ7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB16Q9NRJ7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PCDHB16Q9NRJ7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB16Q9NRJ7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB16Q9NRJ7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHB16Q9NRJ7 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.48■□□□□ 0.71
PCDHB16Q9NRJ7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB16Q9NRJ7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB16Q9NRJ7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHB16Q9NRJ7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB16Q9NRJ7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHB16Q9NRJ7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB16Q9NRJ7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB16Q9NRJ7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB16Q9NRJ7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB16Q9NRJ7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHB16Q9NRJ7 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB16Q9NRJ7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHB16Q9NRJ7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHB16Q9NRJ7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB16Q9NRJ7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PCDHB16Q9NRJ7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHB16Q9NRJ7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHB16Q9NRJ7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHB16Q9NRJ7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PCDHB16Q9NRJ7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHB16Q9NRJ7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDHB16Q9NRJ7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB16Q9NRJ7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PCDHB16Q9NRJ7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHB16Q9NRJ7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms