Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AL356441.2-201ENST00000443009 864 ntBASIC21.63■■□□□ 1.05
NECTIN3Q9NQS3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.63■■□□□ 1.05
NECTIN3Q9NQS3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.63■■□□□ 1.05
NECTIN3Q9NQS3 DUSP8P5-201ENST00000422884 1815 ntBASIC21.63■■□□□ 1.05
NECTIN3Q9NQS3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NECTIN3Q9NQS3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NECTIN3Q9NQS3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.63■■□□□ 1.05
NECTIN3Q9NQS3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NECTIN3Q9NQS3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NECTIN3Q9NQS3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NECTIN3Q9NQS3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NECTIN3Q9NQS3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
NECTIN3Q9NQS3 AC004448.1-201ENST00000458332 883 ntBASIC21.62■■□□□ 1.05
NECTIN3Q9NQS3 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.62■■□□□ 1.05
NECTIN3Q9NQS3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.62■■□□□ 1.05
NECTIN3Q9NQS3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NECTIN3Q9NQS3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NECTIN3Q9NQS3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
NECTIN3Q9NQS3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NECTIN3Q9NQS3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NECTIN3Q9NQS3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
NECTIN3Q9NQS3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
NECTIN3Q9NQS3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NECTIN3Q9NQS3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.61■■□□□ 1.05
NECTIN3Q9NQS3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NECTIN3Q9NQS3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NECTIN3Q9NQS3 KRT16P3-201ENST00000439127 1283 ntBASIC21.61■■□□□ 1.05
NECTIN3Q9NQS3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.61■■□□□ 1.05
NECTIN3Q9NQS3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
NECTIN3Q9NQS3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NECTIN3Q9NQS3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
NECTIN3Q9NQS3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NECTIN3Q9NQS3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NECTIN3Q9NQS3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NECTIN3Q9NQS3 AL022069.1-201ENST00000568025 1636 ntBASIC21.6■■□□□ 1.05
NECTIN3Q9NQS3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.6■■□□□ 1.05
NECTIN3Q9NQS3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
NECTIN3Q9NQS3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.6■■□□□ 1.05
NECTIN3Q9NQS3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.6■■□□□ 1.05
NECTIN3Q9NQS3 MTDHP2-201ENST00000601468 714 ntBASIC21.6■■□□□ 1.05
NECTIN3Q9NQS3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.6■■□□□ 1.05
NECTIN3Q9NQS3 AC010997.5-201ENST00000609182 354 ntBASIC21.6■■□□□ 1.05
NECTIN3Q9NQS3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NECTIN3Q9NQS3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NECTIN3Q9NQS3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN3Q9NQS3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN3Q9NQS3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NECTIN3Q9NQS3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN3Q9NQS3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN3Q9NQS3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN3Q9NQS3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN3Q9NQS3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN3Q9NQS3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
NECTIN3Q9NQS3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN3Q9NQS3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.59■■□□□ 1.05
NECTIN3Q9NQS3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.59■■□□□ 1.05
NECTIN3Q9NQS3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NECTIN3Q9NQS3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.59■■□□□ 1.05
NECTIN3Q9NQS3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NECTIN3Q9NQS3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NECTIN3Q9NQS3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NECTIN3Q9NQS3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NECTIN3Q9NQS3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NECTIN3Q9NQS3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.58■■□□□ 1.05
NECTIN3Q9NQS3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NECTIN3Q9NQS3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.58■■□□□ 1.05
NECTIN3Q9NQS3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.58■■□□□ 1.05
NECTIN3Q9NQS3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NECTIN3Q9NQS3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.57■■□□□ 1.04
NECTIN3Q9NQS3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NECTIN3Q9NQS3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NECTIN3Q9NQS3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NECTIN3Q9NQS3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.57■■□□□ 1.04
NECTIN3Q9NQS3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
NECTIN3Q9NQS3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
NECTIN3Q9NQS3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NECTIN3Q9NQS3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
NECTIN3Q9NQS3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NECTIN3Q9NQS3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.56■■□□□ 1.04
NECTIN3Q9NQS3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NECTIN3Q9NQS3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NECTIN3Q9NQS3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NECTIN3Q9NQS3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.56■■□□□ 1.04
NECTIN3Q9NQS3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.56■■□□□ 1.04
NECTIN3Q9NQS3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NECTIN3Q9NQS3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN3Q9NQS3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NECTIN3Q9NQS3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.55■■□□□ 1.04
NECTIN3Q9NQS3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN3Q9NQS3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.55■■□□□ 1.04
NECTIN3Q9NQS3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN3Q9NQS3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.55■■□□□ 1.04
NECTIN3Q9NQS3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.55■■□□□ 1.04
NECTIN3Q9NQS3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
NECTIN3Q9NQS3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
NECTIN3Q9NQS3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NECTIN3Q9NQS3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
NECTIN3Q9NQS3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.54■■□□□ 1.04
NECTIN3Q9NQS3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
NECTIN3Q9NQS3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 987 ms