Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF556Q9HAH1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
ZNF556Q9HAH1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.93■□□□□ 0.94
ZNF556Q9HAH1 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.93■□□□□ 0.94
ZNF556Q9HAH1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF556Q9HAH1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.93■□□□□ 0.94
ZNF556Q9HAH1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF556Q9HAH1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.93■□□□□ 0.94
ZNF556Q9HAH1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF556Q9HAH1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF556Q9HAH1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.92■□□□□ 0.94
ZNF556Q9HAH1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ZNF556Q9HAH1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF556Q9HAH1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ZNF556Q9HAH1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.92■□□□□ 0.94
ZNF556Q9HAH1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.92■□□□□ 0.94
ZNF556Q9HAH1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.92■□□□□ 0.94
ZNF556Q9HAH1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF556Q9HAH1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.92■□□□□ 0.94
ZNF556Q9HAH1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.92■□□□□ 0.94
ZNF556Q9HAH1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
ZNF556Q9HAH1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF556Q9HAH1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF556Q9HAH1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.92■□□□□ 0.94
ZNF556Q9HAH1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF556Q9HAH1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF556Q9HAH1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF556Q9HAH1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF556Q9HAH1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ZNF556Q9HAH1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF556Q9HAH1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF556Q9HAH1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF556Q9HAH1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.91■□□□□ 0.94
ZNF556Q9HAH1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.91■□□□□ 0.94
ZNF556Q9HAH1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF556Q9HAH1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ZNF556Q9HAH1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF556Q9HAH1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ZNF556Q9HAH1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF556Q9HAH1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNF556Q9HAH1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF556Q9HAH1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ZNF556Q9HAH1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
ZNF556Q9HAH1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF556Q9HAH1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF556Q9HAH1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF556Q9HAH1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF556Q9HAH1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
ZNF556Q9HAH1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.89■□□□□ 0.94
ZNF556Q9HAH1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZNF556Q9HAH1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.89■□□□□ 0.94
ZNF556Q9HAH1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
ZNF556Q9HAH1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF556Q9HAH1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF556Q9HAH1 MIR639-201ENST00000384974 98 ntBASIC20.89■□□□□ 0.93
ZNF556Q9HAH1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.89■□□□□ 0.93
ZNF556Q9HAH1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF556Q9HAH1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF556Q9HAH1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.89■□□□□ 0.93
ZNF556Q9HAH1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ZNF556Q9HAH1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF556Q9HAH1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF556Q9HAH1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
ZNF556Q9HAH1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF556Q9HAH1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF556Q9HAH1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF556Q9HAH1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF556Q9HAH1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF556Q9HAH1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF556Q9HAH1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF556Q9HAH1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ZNF556Q9HAH1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ZNF556Q9HAH1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.88■□□□□ 0.93
ZNF556Q9HAH1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.88■□□□□ 0.93
ZNF556Q9HAH1 LINC00565-201ENST00000562710 2331 ntBASIC20.88■□□□□ 0.93
ZNF556Q9HAH1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF556Q9HAH1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF556Q9HAH1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF556Q9HAH1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ZNF556Q9HAH1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF556Q9HAH1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF556Q9HAH1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF556Q9HAH1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.87■□□□□ 0.93
ZNF556Q9HAH1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.87■□□□□ 0.93
ZNF556Q9HAH1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ZNF556Q9HAH1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF556Q9HAH1 GUSBP5-202ENST00000510805 1989 ntBASIC20.86■□□□□ 0.93
ZNF556Q9HAH1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNF556Q9HAH1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF556Q9HAH1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ZNF556Q9HAH1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
ZNF556Q9HAH1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF556Q9HAH1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ZNF556Q9HAH1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF556Q9HAH1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF556Q9HAH1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNF556Q9HAH1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
ZNF556Q9HAH1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNF556Q9HAH1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.85■□□□□ 0.93
ZNF556Q9HAH1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms