Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.35■□□□□ 0.37
MS4A6AQ9H2W1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.34■□□□□ 0.37
MS4A6AQ9H2W1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A6AQ9H2W1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A6AQ9H2W1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A6AQ9H2W1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A6AQ9H2W1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
MS4A6AQ9H2W1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A6AQ9H2W1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A6AQ9H2W1 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.34■□□□□ 0.37
MS4A6AQ9H2W1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A6AQ9H2W1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.34■□□□□ 0.37
MS4A6AQ9H2W1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.34■□□□□ 0.37
MS4A6AQ9H2W1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A6AQ9H2W1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A6AQ9H2W1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.34■□□□□ 0.37
MS4A6AQ9H2W1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A6AQ9H2W1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
MS4A6AQ9H2W1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
MS4A6AQ9H2W1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MS4A6AQ9H2W1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MS4A6AQ9H2W1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
MS4A6AQ9H2W1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
MS4A6AQ9H2W1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.33■□□□□ 0.37
MS4A6AQ9H2W1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MS4A6AQ9H2W1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.33■□□□□ 0.36
MS4A6AQ9H2W1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.33■□□□□ 0.36
MS4A6AQ9H2W1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.33■□□□□ 0.36
MS4A6AQ9H2W1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
MS4A6AQ9H2W1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A6AQ9H2W1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
MS4A6AQ9H2W1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.33■□□□□ 0.36
MS4A6AQ9H2W1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
MS4A6AQ9H2W1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A6AQ9H2W1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A6AQ9H2W1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
MS4A6AQ9H2W1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.32■□□□□ 0.36
MS4A6AQ9H2W1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A6AQ9H2W1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
MS4A6AQ9H2W1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A6AQ9H2W1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A6AQ9H2W1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A6AQ9H2W1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.32■□□□□ 0.36
MS4A6AQ9H2W1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A6AQ9H2W1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MS4A6AQ9H2W1 AL024507.2-201ENST00000606070 2574 ntBASIC17.32■□□□□ 0.36
MS4A6AQ9H2W1 AC131274.2-201ENST00000580697 1507 ntBASIC17.31■□□□□ 0.36
MS4A6AQ9H2W1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A6AQ9H2W1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A6AQ9H2W1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A6AQ9H2W1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A6AQ9H2W1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.31■□□□□ 0.36
MS4A6AQ9H2W1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MS4A6AQ9H2W1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
MS4A6AQ9H2W1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.31■□□□□ 0.36
MS4A6AQ9H2W1 AC137630.3-201ENST00000607245 391 ntBASIC17.31■□□□□ 0.36
MS4A6AQ9H2W1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A6AQ9H2W1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A6AQ9H2W1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A6AQ9H2W1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
MS4A6AQ9H2W1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MS4A6AQ9H2W1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A6AQ9H2W1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
MS4A6AQ9H2W1 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.3■□□□□ 0.36
MS4A6AQ9H2W1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A6AQ9H2W1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A6AQ9H2W1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MS4A6AQ9H2W1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.3■□□□□ 0.36
MS4A6AQ9H2W1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.3■□□□□ 0.36
MS4A6AQ9H2W1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A6AQ9H2W1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MS4A6AQ9H2W1 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A6AQ9H2W1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A6AQ9H2W1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MS4A6AQ9H2W1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MS4A6AQ9H2W1 ABCB10P4-201ENST00000566803 2184 ntBASIC17.29■□□□□ 0.36
MS4A6AQ9H2W1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.29■□□□□ 0.36
MS4A6AQ9H2W1 BX664725.1-201ENST00000438252 379 ntBASIC17.29■□□□□ 0.36
MS4A6AQ9H2W1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MS4A6AQ9H2W1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.29■□□□□ 0.36
MS4A6AQ9H2W1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MS4A6AQ9H2W1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MS4A6AQ9H2W1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MS4A6AQ9H2W1 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
MS4A6AQ9H2W1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.29■□□□□ 0.36
MS4A6AQ9H2W1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MS4A6AQ9H2W1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A6AQ9H2W1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.28■□□□□ 0.36
MS4A6AQ9H2W1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A6AQ9H2W1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A6AQ9H2W1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MS4A6AQ9H2W1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A6AQ9H2W1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A6AQ9H2W1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A6AQ9H2W1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.28■□□□□ 0.36
MS4A6AQ9H2W1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A6AQ9H2W1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.28■□□□□ 0.36
MS4A6AQ9H2W1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MS4A6AQ9H2W1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.28■□□□□ 0.36
MS4A6AQ9H2W1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms