Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLIRPQ9GZT3 AC092667.1-201ENST00000434301 2586 ntBASIC20.04■□□□□ 0.8
SLIRPQ9GZT3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SLIRPQ9GZT3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLIRPQ9GZT3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLIRPQ9GZT3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SLIRPQ9GZT3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SLIRPQ9GZT3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLIRPQ9GZT3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.04■□□□□ 0.8
SLIRPQ9GZT3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.04■□□□□ 0.8
SLIRPQ9GZT3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SLIRPQ9GZT3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLIRPQ9GZT3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.03■□□□□ 0.8
SLIRPQ9GZT3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SLIRPQ9GZT3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SLIRPQ9GZT3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SLIRPQ9GZT3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLIRPQ9GZT3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLIRPQ9GZT3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SLIRPQ9GZT3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLIRPQ9GZT3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SLIRPQ9GZT3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLIRPQ9GZT3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLIRPQ9GZT3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SLIRPQ9GZT3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLIRPQ9GZT3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.02■□□□□ 0.8
SLIRPQ9GZT3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
SLIRPQ9GZT3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLIRPQ9GZT3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.02■□□□□ 0.79
SLIRPQ9GZT3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLIRPQ9GZT3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLIRPQ9GZT3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLIRPQ9GZT3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLIRPQ9GZT3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLIRPQ9GZT3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.01■□□□□ 0.79
SLIRPQ9GZT3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLIRPQ9GZT3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLIRPQ9GZT3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SLIRPQ9GZT3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLIRPQ9GZT3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLIRPQ9GZT3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLIRPQ9GZT3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLIRPQ9GZT3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SLIRPQ9GZT3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLIRPQ9GZT3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20■□□□□ 0.79
SLIRPQ9GZT3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
SLIRPQ9GZT3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLIRPQ9GZT3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20■□□□□ 0.79
SLIRPQ9GZT3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
SLIRPQ9GZT3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLIRPQ9GZT3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLIRPQ9GZT3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20■□□□□ 0.79
SLIRPQ9GZT3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20■□□□□ 0.79
SLIRPQ9GZT3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20■□□□□ 0.79
SLIRPQ9GZT3 AC008813.1-201ENST00000536597 885 ntBASIC20■□□□□ 0.79
SLIRPQ9GZT3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20■□□□□ 0.79
SLIRPQ9GZT3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20■□□□□ 0.79
SLIRPQ9GZT3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20■□□□□ 0.79
SLIRPQ9GZT3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
SLIRPQ9GZT3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SLIRPQ9GZT3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20■□□□□ 0.79
SLIRPQ9GZT3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLIRPQ9GZT3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.99■□□□□ 0.79
SLIRPQ9GZT3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLIRPQ9GZT3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLIRPQ9GZT3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SLIRPQ9GZT3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLIRPQ9GZT3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.99■□□□□ 0.79
SLIRPQ9GZT3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLIRPQ9GZT3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLIRPQ9GZT3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.99■□□□□ 0.79
SLIRPQ9GZT3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLIRPQ9GZT3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLIRPQ9GZT3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLIRPQ9GZT3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
SLIRPQ9GZT3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLIRPQ9GZT3 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.98■□□□□ 0.79
SLIRPQ9GZT3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLIRPQ9GZT3 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.98■□□□□ 0.79
SLIRPQ9GZT3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.98■□□□□ 0.79
SLIRPQ9GZT3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLIRPQ9GZT3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SLIRPQ9GZT3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SLIRPQ9GZT3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLIRPQ9GZT3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLIRPQ9GZT3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.98■□□□□ 0.79
SLIRPQ9GZT3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLIRPQ9GZT3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLIRPQ9GZT3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLIRPQ9GZT3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SLIRPQ9GZT3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SLIRPQ9GZT3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.97■□□□□ 0.79
SLIRPQ9GZT3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.97■□□□□ 0.79
SLIRPQ9GZT3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLIRPQ9GZT3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.96■□□□□ 0.79
SLIRPQ9GZT3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.96■□□□□ 0.79
SLIRPQ9GZT3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.96■□□□□ 0.79
SLIRPQ9GZT3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SLIRPQ9GZT3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.96■□□□□ 0.79
SLIRPQ9GZT3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms