Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNTNAP3Q9BZ76 SMUG1P1-201ENST00000590640 811 ntBASIC21.76■■□□□ 1.07
CNTNAP3Q9BZ76 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CNTNAP3Q9BZ76 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CNTNAP3Q9BZ76 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNTNAP3Q9BZ76 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.75■■□□□ 1.07
CNTNAP3Q9BZ76 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CNTNAP3Q9BZ76 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNTNAP3Q9BZ76 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNTNAP3Q9BZ76 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNTNAP3Q9BZ76 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNTNAP3Q9BZ76 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.74■■□□□ 1.07
CNTNAP3Q9BZ76 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNTNAP3Q9BZ76 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CNTNAP3Q9BZ76 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.74■■□□□ 1.07
CNTNAP3Q9BZ76 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNTNAP3Q9BZ76 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CNTNAP3Q9BZ76 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP3Q9BZ76 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP3Q9BZ76 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP3Q9BZ76 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.73■■□□□ 1.07
CNTNAP3Q9BZ76 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.73■■□□□ 1.07
CNTNAP3Q9BZ76 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.73■■□□□ 1.07
CNTNAP3Q9BZ76 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.73■■□□□ 1.07
CNTNAP3Q9BZ76 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP3Q9BZ76 KRT18P61-201ENST00000585825 1298 ntBASIC21.73■■□□□ 1.07
CNTNAP3Q9BZ76 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.73■■□□□ 1.07
CNTNAP3Q9BZ76 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP3Q9BZ76 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP3Q9BZ76 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CNTNAP3Q9BZ76 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.73■■□□□ 1.07
CNTNAP3Q9BZ76 AC006455.2-201ENST00000429931 906 ntBASIC21.72■■□□□ 1.07
CNTNAP3Q9BZ76 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP3Q9BZ76 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP3Q9BZ76 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CNTNAP3Q9BZ76 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CNTNAP3Q9BZ76 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.72■■□□□ 1.07
CNTNAP3Q9BZ76 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.71■■□□□ 1.07
CNTNAP3Q9BZ76 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP3Q9BZ76 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CNTNAP3Q9BZ76 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP3Q9BZ76 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP3Q9BZ76 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP3Q9BZ76 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.71■■□□□ 1.07
CNTNAP3Q9BZ76 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.71■■□□□ 1.07
CNTNAP3Q9BZ76 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.71■■□□□ 1.07
CNTNAP3Q9BZ76 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.71■■□□□ 1.07
CNTNAP3Q9BZ76 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP3Q9BZ76 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.71■■□□□ 1.07
CNTNAP3Q9BZ76 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.71■■□□□ 1.07
CNTNAP3Q9BZ76 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.7■■□□□ 1.06
CNTNAP3Q9BZ76 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.7■■□□□ 1.06
CNTNAP3Q9BZ76 MIR3181-201ENST00000578512 73 ntBASIC21.7■■□□□ 1.06
CNTNAP3Q9BZ76 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNTNAP3Q9BZ76 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CNTNAP3Q9BZ76 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNTNAP3Q9BZ76 KRT18P29-201ENST00000397031 1267 ntBASIC21.69■■□□□ 1.06
CNTNAP3Q9BZ76 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.69■■□□□ 1.06
CNTNAP3Q9BZ76 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.69■■□□□ 1.06
CNTNAP3Q9BZ76 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.69■■□□□ 1.06
CNTNAP3Q9BZ76 AP004607.4-201ENST00000530158 1459 ntBASIC21.69■■□□□ 1.06
CNTNAP3Q9BZ76 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNTNAP3Q9BZ76 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.69■■□□□ 1.06
CNTNAP3Q9BZ76 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.69■■□□□ 1.06
CNTNAP3Q9BZ76 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CNTNAP3Q9BZ76 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.68■■□□□ 1.06
CNTNAP3Q9BZ76 AP005435.1-201ENST00000529293 1178 ntBASIC21.68■■□□□ 1.06
CNTNAP3Q9BZ76 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.68■■□□□ 1.06
CNTNAP3Q9BZ76 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CNTNAP3Q9BZ76 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CNTNAP3Q9BZ76 AL121749.1-202ENST00000609313 2153 ntBASIC21.67■■□□□ 1.06
CNTNAP3Q9BZ76 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNTNAP3Q9BZ76 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNTNAP3Q9BZ76 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNTNAP3Q9BZ76 RPS2P52-201ENST00000469610 820 ntBASIC21.67■■□□□ 1.06
CNTNAP3Q9BZ76 IGHV3-19-201ENST00000521488 291 ntBASIC21.67■■□□□ 1.06
CNTNAP3Q9BZ76 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.67■■□□□ 1.06
CNTNAP3Q9BZ76 ITM2C-210ENST00000620962 501 ntBASIC21.67■■□□□ 1.06
CNTNAP3Q9BZ76 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.67■■□□□ 1.06
CNTNAP3Q9BZ76 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP3Q9BZ76 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP3Q9BZ76 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.66■■□□□ 1.06
CNTNAP3Q9BZ76 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.66■■□□□ 1.06
CNTNAP3Q9BZ76 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP3Q9BZ76 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.66■■□□□ 1.06
CNTNAP3Q9BZ76 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP3Q9BZ76 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP3Q9BZ76 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.66■■□□□ 1.06
CNTNAP3Q9BZ76 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP3Q9BZ76 TPRG1LP1-201ENST00000598702 760 ntBASIC21.66■■□□□ 1.06
CNTNAP3Q9BZ76 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP3Q9BZ76 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNTNAP3Q9BZ76 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP3Q9BZ76 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.65■■□□□ 1.06
CNTNAP3Q9BZ76 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.65■■□□□ 1.06
CNTNAP3Q9BZ76 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.65■■□□□ 1.06
CNTNAP3Q9BZ76 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP3Q9BZ76 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNTNAP3Q9BZ76 AL596275.1-201ENST00000423464 877 ntBASIC21.65■■□□□ 1.06
CNTNAP3Q9BZ76 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms