Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.67■■□□□ 1.22
LYSMD1Q96S90 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.67■■□□□ 1.22
LYSMD1Q96S90 AL512631.2-201ENST00000604634 923 ntBASIC22.67■■□□□ 1.22
LYSMD1Q96S90 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.67■■□□□ 1.22
LYSMD1Q96S90 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
LYSMD1Q96S90 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LYSMD1Q96S90 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LYSMD1Q96S90 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LYSMD1Q96S90 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LYSMD1Q96S90 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.66■■□□□ 1.22
LYSMD1Q96S90 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.66■■□□□ 1.22
LYSMD1Q96S90 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LYSMD1Q96S90 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.66■■□□□ 1.22
LYSMD1Q96S90 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.66■■□□□ 1.22
LYSMD1Q96S90 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
LYSMD1Q96S90 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
LYSMD1Q96S90 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.66■■□□□ 1.22
LYSMD1Q96S90 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
LYSMD1Q96S90 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LYSMD1Q96S90 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.66■■□□□ 1.22
LYSMD1Q96S90 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LYSMD1Q96S90 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
LYSMD1Q96S90 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.66■■□□□ 1.22
LYSMD1Q96S90 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LYSMD1Q96S90 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
LYSMD1Q96S90 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.65■■□□□ 1.22
LYSMD1Q96S90 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LYSMD1Q96S90 AC009102.2-201ENST00000606772 1639 ntBASIC22.65■■□□□ 1.22
LYSMD1Q96S90 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.65■■□□□ 1.22
LYSMD1Q96S90 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LYSMD1Q96S90 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.65■■□□□ 1.22
LYSMD1Q96S90 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.65■■□□□ 1.22
LYSMD1Q96S90 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LYSMD1Q96S90 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LYSMD1Q96S90 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LYSMD1Q96S90 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LYSMD1Q96S90 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
LYSMD1Q96S90 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
LYSMD1Q96S90 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
LYSMD1Q96S90 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
LYSMD1Q96S90 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LYSMD1Q96S90 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.64■■□□□ 1.21
LYSMD1Q96S90 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
LYSMD1Q96S90 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LYSMD1Q96S90 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
LYSMD1Q96S90 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LYSMD1Q96S90 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
LYSMD1Q96S90 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LYSMD1Q96S90 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LYSMD1Q96S90 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LYSMD1Q96S90 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.63■■□□□ 1.21
LYSMD1Q96S90 AC131281.2-201ENST00000520478 145 ntBASIC22.63■■□□□ 1.21
LYSMD1Q96S90 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LYSMD1Q96S90 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
LYSMD1Q96S90 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
LYSMD1Q96S90 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LYSMD1Q96S90 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LYSMD1Q96S90 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
LYSMD1Q96S90 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LYSMD1Q96S90 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.62■■□□□ 1.21
LYSMD1Q96S90 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.62■■□□□ 1.21
LYSMD1Q96S90 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.62■■□□□ 1.21
LYSMD1Q96S90 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LYSMD1Q96S90 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LYSMD1Q96S90 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
LYSMD1Q96S90 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
LYSMD1Q96S90 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
LYSMD1Q96S90 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LYSMD1Q96S90 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
LYSMD1Q96S90 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LYSMD1Q96S90 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LYSMD1Q96S90 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.61■■□□□ 1.21
LYSMD1Q96S90 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.61■■□□□ 1.21
LYSMD1Q96S90 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.61■■□□□ 1.21
LYSMD1Q96S90 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LYSMD1Q96S90 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LYSMD1Q96S90 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LYSMD1Q96S90 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.61■■□□□ 1.21
LYSMD1Q96S90 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
LYSMD1Q96S90 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
LYSMD1Q96S90 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.6■■□□□ 1.21
LYSMD1Q96S90 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LYSMD1Q96S90 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LYSMD1Q96S90 C17orf82-201ENST00000623772 1530 ntBASIC22.6■■□□□ 1.21
LYSMD1Q96S90 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LYSMD1Q96S90 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
LYSMD1Q96S90 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LYSMD1Q96S90 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.59■■□□□ 1.21
LYSMD1Q96S90 MIR4466-201ENST00000606121 54 ntBASIC22.59■■□□□ 1.21
LYSMD1Q96S90 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LYSMD1Q96S90 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LYSMD1Q96S90 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
LYSMD1Q96S90 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LYSMD1Q96S90 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
LYSMD1Q96S90 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
LYSMD1Q96S90 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
LYSMD1Q96S90 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LYSMD1Q96S90 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
LYSMD1Q96S90 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
LYSMD1Q96S90 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms