Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40CQ96S21 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40CQ96S21 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB40CQ96S21 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40CQ96S21 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RAB40CQ96S21 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB40CQ96S21 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40CQ96S21 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RAB40CQ96S21 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40CQ96S21 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RAB40CQ96S21 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB40CQ96S21 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB40CQ96S21 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB40CQ96S21 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB40CQ96S21 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB40CQ96S21 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB40CQ96S21 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40CQ96S21 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40CQ96S21 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40CQ96S21 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40CQ96S21 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RAB40CQ96S21 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40CQ96S21 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RAB40CQ96S21 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40CQ96S21 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40CQ96S21 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40CQ96S21 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB40CQ96S21 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RAB40CQ96S21 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.33■□□□□ 0.53
RAB40CQ96S21 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.33■□□□□ 0.53
RAB40CQ96S21 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB40CQ96S21 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB40CQ96S21 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RAB40CQ96S21 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40CQ96S21 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40CQ96S21 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RAB40CQ96S21 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RAB40CQ96S21 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40CQ96S21 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40CQ96S21 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB40CQ96S21 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40CQ96S21 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40CQ96S21 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40CQ96S21 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40CQ96S21 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RAB40CQ96S21 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40CQ96S21 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40CQ96S21 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40CQ96S21 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RAB40CQ96S21 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40CQ96S21 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RAB40CQ96S21 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RAB40CQ96S21 ESRRAP2-201ENST00000418437 1549 ntBASIC18.32■□□□□ 0.52
RAB40CQ96S21 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40CQ96S21 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB40CQ96S21 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RAB40CQ96S21 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40CQ96S21 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40CQ96S21 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.31■□□□□ 0.52
RAB40CQ96S21 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40CQ96S21 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
RAB40CQ96S21 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40CQ96S21 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40CQ96S21 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RAB40CQ96S21 AC090877.2-201ENST00000558441 1738 ntBASIC18.31■□□□□ 0.52
RAB40CQ96S21 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40CQ96S21 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40CQ96S21 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB40CQ96S21 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40CQ96S21 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB40CQ96S21 AC242852.2-201ENST00000615738 1807 ntBASIC18.3■□□□□ 0.52
RAB40CQ96S21 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40CQ96S21 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40CQ96S21 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB40CQ96S21 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40CQ96S21 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40CQ96S21 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB40CQ96S21 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40CQ96S21 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40CQ96S21 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB40CQ96S21 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
RAB40CQ96S21 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB40CQ96S21 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RAB40CQ96S21 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40CQ96S21 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40CQ96S21 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB40CQ96S21 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RAB40CQ96S21 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RAB40CQ96S21 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.29■□□□□ 0.52
RAB40CQ96S21 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.29■□□□□ 0.52
RAB40CQ96S21 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB40CQ96S21 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40CQ96S21 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
RAB40CQ96S21 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB40CQ96S21 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
RAB40CQ96S21 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.29■□□□□ 0.52
RAB40CQ96S21 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.28■□□□□ 0.52
RAB40CQ96S21 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
RAB40CQ96S21 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAB40CQ96S21 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms