Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.78■■□□□ 1.08
CNTNAP3BQ96NU0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
CNTNAP3BQ96NU0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNTNAP3BQ96NU0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNTNAP3BQ96NU0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
CNTNAP3BQ96NU0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNTNAP3BQ96NU0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CNTNAP3BQ96NU0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNTNAP3BQ96NU0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CNTNAP3BQ96NU0 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.77■■□□□ 1.08
CNTNAP3BQ96NU0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.77■■□□□ 1.08
CNTNAP3BQ96NU0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.77■■□□□ 1.08
CNTNAP3BQ96NU0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
CNTNAP3BQ96NU0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNTNAP3BQ96NU0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.77■■□□□ 1.08
CNTNAP3BQ96NU0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
CNTNAP3BQ96NU0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.07
CNTNAP3BQ96NU0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CNTNAP3BQ96NU0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CNTNAP3BQ96NU0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNTNAP3BQ96NU0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CNTNAP3BQ96NU0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNTNAP3BQ96NU0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
CNTNAP3BQ96NU0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.76■■□□□ 1.07
CNTNAP3BQ96NU0 MIR1224-201ENST00000408193 85 ntBASIC21.76■■□□□ 1.07
CNTNAP3BQ96NU0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNTNAP3BQ96NU0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.76■■□□□ 1.07
CNTNAP3BQ96NU0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNTNAP3BQ96NU0 SMUG1P1-201ENST00000590640 811 ntBASIC21.76■■□□□ 1.07
CNTNAP3BQ96NU0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CNTNAP3BQ96NU0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNTNAP3BQ96NU0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNTNAP3BQ96NU0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.75■■□□□ 1.07
CNTNAP3BQ96NU0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CNTNAP3BQ96NU0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNTNAP3BQ96NU0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNTNAP3BQ96NU0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNTNAP3BQ96NU0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.74■■□□□ 1.07
CNTNAP3BQ96NU0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNTNAP3BQ96NU0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.74■■□□□ 1.07
CNTNAP3BQ96NU0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNTNAP3BQ96NU0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CNTNAP3BQ96NU0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP3BQ96NU0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP3BQ96NU0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP3BQ96NU0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.73■■□□□ 1.07
CNTNAP3BQ96NU0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.73■■□□□ 1.07
CNTNAP3BQ96NU0 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.73■■□□□ 1.07
CNTNAP3BQ96NU0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.73■■□□□ 1.07
CNTNAP3BQ96NU0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP3BQ96NU0 KRT18P61-201ENST00000585825 1298 ntBASIC21.73■■□□□ 1.07
CNTNAP3BQ96NU0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.73■■□□□ 1.07
CNTNAP3BQ96NU0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.73■■□□□ 1.07
CNTNAP3BQ96NU0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP3BQ96NU0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNTNAP3BQ96NU0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CNTNAP3BQ96NU0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.73■■□□□ 1.07
CNTNAP3BQ96NU0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CNTNAP3BQ96NU0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP3BQ96NU0 AC006455.2-201ENST00000429931 906 ntBASIC21.72■■□□□ 1.07
CNTNAP3BQ96NU0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP3BQ96NU0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP3BQ96NU0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CNTNAP3BQ96NU0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP3BQ96NU0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP3BQ96NU0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNTNAP3BQ96NU0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CNTNAP3BQ96NU0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.72■■□□□ 1.07
CNTNAP3BQ96NU0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP3BQ96NU0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CNTNAP3BQ96NU0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP3BQ96NU0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP3BQ96NU0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP3BQ96NU0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.71■■□□□ 1.07
CNTNAP3BQ96NU0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.71■■□□□ 1.07
CNTNAP3BQ96NU0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.71■■□□□ 1.07
CNTNAP3BQ96NU0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.71■■□□□ 1.07
CNTNAP3BQ96NU0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP3BQ96NU0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.71■■□□□ 1.07
CNTNAP3BQ96NU0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.71■■□□□ 1.07
CNTNAP3BQ96NU0 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP3BQ96NU0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.71■■□□□ 1.07
CNTNAP3BQ96NU0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNTNAP3BQ96NU0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.7■■□□□ 1.06
CNTNAP3BQ96NU0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.7■■□□□ 1.06
CNTNAP3BQ96NU0 MIR3181-201ENST00000578512 73 ntBASIC21.7■■□□□ 1.06
CNTNAP3BQ96NU0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNTNAP3BQ96NU0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CNTNAP3BQ96NU0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNTNAP3BQ96NU0 KRT18P29-201ENST00000397031 1267 ntBASIC21.69■■□□□ 1.06
CNTNAP3BQ96NU0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.69■■□□□ 1.06
CNTNAP3BQ96NU0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.69■■□□□ 1.06
CNTNAP3BQ96NU0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.69■■□□□ 1.06
CNTNAP3BQ96NU0 AP004607.4-201ENST00000530158 1459 ntBASIC21.69■■□□□ 1.06
CNTNAP3BQ96NU0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.69■■□□□ 1.06
CNTNAP3BQ96NU0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.69■■□□□ 1.06
CNTNAP3BQ96NU0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNTNAP3BQ96NU0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CNTNAP3BQ96NU0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.68■■□□□ 1.06
CNTNAP3BQ96NU0 AP005435.1-201ENST00000529293 1178 ntBASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms