Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC46A1Q96NT5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC46A1Q96NT5 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC46A1Q96NT5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC46A1Q96NT5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC46A1Q96NT5 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SLC46A1Q96NT5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC46A1Q96NT5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC46A1Q96NT5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC46A1Q96NT5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC46A1Q96NT5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SLC46A1Q96NT5 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC46A1Q96NT5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC46A1Q96NT5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC46A1Q96NT5 AC241377.3-202ENST00000626088 1088 ntBASIC21.76■■□□□ 1.07
SLC46A1Q96NT5 AC241585.3-202ENST00000628937 1088 ntBASIC21.76■■□□□ 1.07
SLC46A1Q96NT5 AC245100.8-202ENST00000629247 1058 ntBASIC21.76■■□□□ 1.07
SLC46A1Q96NT5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC46A1Q96NT5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC46A1Q96NT5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC46A1Q96NT5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
SLC46A1Q96NT5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC46A1Q96NT5 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC46A1Q96NT5 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC46A1Q96NT5 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC46A1Q96NT5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC46A1Q96NT5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC46A1Q96NT5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.75■■□□□ 1.07
SLC46A1Q96NT5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SLC46A1Q96NT5 AC136469.2-201ENST00000623944 1028 ntBASIC21.75■■□□□ 1.07
SLC46A1Q96NT5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC46A1Q96NT5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
SLC46A1Q96NT5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC46A1Q96NT5 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC46A1Q96NT5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC46A1Q96NT5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC46A1Q96NT5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC46A1Q96NT5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC46A1Q96NT5 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC46A1Q96NT5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC46A1Q96NT5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC46A1Q96NT5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC46A1Q96NT5 AP003733.4-201ENST00000623785 1697 ntBASIC21.73■■□□□ 1.07
SLC46A1Q96NT5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC46A1Q96NT5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC46A1Q96NT5 AC233992.3-201ENST00000607491 485 ntBASIC21.73■■□□□ 1.07
SLC46A1Q96NT5 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.73■■□□□ 1.07
SLC46A1Q96NT5 C17orf82-201ENST00000623772 1530 ntBASIC21.73■■□□□ 1.07
SLC46A1Q96NT5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SLC46A1Q96NT5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC46A1Q96NT5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC46A1Q96NT5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC46A1Q96NT5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC46A1Q96NT5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.72■■□□□ 1.07
SLC46A1Q96NT5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC46A1Q96NT5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC46A1Q96NT5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC46A1Q96NT5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.72■■□□□ 1.07
SLC46A1Q96NT5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC46A1Q96NT5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.72■■□□□ 1.07
SLC46A1Q96NT5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC46A1Q96NT5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC46A1Q96NT5 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC46A1Q96NT5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC46A1Q96NT5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC46A1Q96NT5 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC46A1Q96NT5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.7■■□□□ 1.07
SLC46A1Q96NT5 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.7■■□□□ 1.06
SLC46A1Q96NT5 BX842568.3-201ENST00000418104 571 ntBASIC21.7■■□□□ 1.06
SLC46A1Q96NT5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC46A1Q96NT5 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC46A1Q96NT5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC46A1Q96NT5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC46A1Q96NT5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC46A1Q96NT5 AC138932.3-201ENST00000567634 1902 ntBASIC21.7■■□□□ 1.06
SLC46A1Q96NT5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC46A1Q96NT5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC46A1Q96NT5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC46A1Q96NT5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC46A1Q96NT5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC46A1Q96NT5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.69■■□□□ 1.06
SLC46A1Q96NT5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC46A1Q96NT5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC46A1Q96NT5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
SLC46A1Q96NT5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC46A1Q96NT5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC46A1Q96NT5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC46A1Q96NT5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC46A1Q96NT5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SLC46A1Q96NT5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC46A1Q96NT5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC46A1Q96NT5 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.68■■□□□ 1.06
SLC46A1Q96NT5 AL022069.1-201ENST00000568025 1636 ntBASIC21.68■■□□□ 1.06
SLC46A1Q96NT5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC46A1Q96NT5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SLC46A1Q96NT5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC46A1Q96NT5 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC46A1Q96NT5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC46A1Q96NT5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC46A1Q96NT5 AC034268.1-201ENST00000441047 882 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms