Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RITA1Q96K30 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.25■□□□□ 0.51
RITA1Q96K30 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RITA1Q96K30 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RITA1Q96K30 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RITA1Q96K30 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RITA1Q96K30 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RITA1Q96K30 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RITA1Q96K30 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.24■□□□□ 0.51
RITA1Q96K30 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.24■□□□□ 0.51
RITA1Q96K30 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.23■□□□□ 0.51
RITA1Q96K30 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RITA1Q96K30 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RITA1Q96K30 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RITA1Q96K30 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
RITA1Q96K30 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.23■□□□□ 0.51
RITA1Q96K30 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.23■□□□□ 0.51
RITA1Q96K30 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RITA1Q96K30 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RITA1Q96K30 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
RITA1Q96K30 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RITA1Q96K30 AL035685.1-201ENST00000636663 812 ntBASIC18.23■□□□□ 0.51
RITA1Q96K30 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.23■□□□□ 0.51
RITA1Q96K30 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RITA1Q96K30 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RITA1Q96K30 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.23■□□□□ 0.51
RITA1Q96K30 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RITA1Q96K30 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.22■□□□□ 0.51
RITA1Q96K30 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RITA1Q96K30 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RITA1Q96K30 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.22■□□□□ 0.51
RITA1Q96K30 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.22■□□□□ 0.51
RITA1Q96K30 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RITA1Q96K30 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RITA1Q96K30 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.22■□□□□ 0.51
RITA1Q96K30 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.22■□□□□ 0.51
RITA1Q96K30 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RITA1Q96K30 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RITA1Q96K30 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RITA1Q96K30 ANOS2P-203ENST00000472227 1816 ntBASIC18.21■□□□□ 0.51
RITA1Q96K30 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RITA1Q96K30 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RITA1Q96K30 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RITA1Q96K30 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.21■□□□□ 0.51
RITA1Q96K30 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.21■□□□□ 0.51
RITA1Q96K30 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RITA1Q96K30 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RITA1Q96K30 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RITA1Q96K30 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.2■□□□□ 0.5
RITA1Q96K30 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RITA1Q96K30 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RITA1Q96K30 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.2■□□□□ 0.5
RITA1Q96K30 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
RITA1Q96K30 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.2■□□□□ 0.5
RITA1Q96K30 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.2■□□□□ 0.5
RITA1Q96K30 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.2■□□□□ 0.5
RITA1Q96K30 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.2■□□□□ 0.5
RITA1Q96K30 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.2■□□□□ 0.5
RITA1Q96K30 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RITA1Q96K30 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RITA1Q96K30 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RITA1Q96K30 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RITA1Q96K30 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.2■□□□□ 0.5
RITA1Q96K30 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
RITA1Q96K30 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.2■□□□□ 0.5
RITA1Q96K30 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RITA1Q96K30 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RITA1Q96K30 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.19■□□□□ 0.5
RITA1Q96K30 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RITA1Q96K30 C9orf163-202ENST00000624034 2573 ntBASIC18.19■□□□□ 0.5
RITA1Q96K30 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RITA1Q96K30 TSPY9P-201ENST00000440215 945 ntBASIC18.19■□□□□ 0.5
RITA1Q96K30 TSPY11P-201ENST00000442607 1045 ntBASIC18.19■□□□□ 0.5
RITA1Q96K30 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.19■□□□□ 0.5
RITA1Q96K30 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RITA1Q96K30 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RITA1Q96K30 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RITA1Q96K30 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RITA1Q96K30 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RITA1Q96K30 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RITA1Q96K30 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RITA1Q96K30 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RITA1Q96K30 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RITA1Q96K30 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RITA1Q96K30 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RITA1Q96K30 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.18■□□□□ 0.5
RITA1Q96K30 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RITA1Q96K30 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RITA1Q96K30 MIR6722-201ENST00000617286 78 ntBASIC18.18■□□□□ 0.5
RITA1Q96K30 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RITA1Q96K30 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.18■□□□□ 0.5
RITA1Q96K30 DUSP8P5-201ENST00000422884 1815 ntBASIC18.18■□□□□ 0.5
RITA1Q96K30 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RITA1Q96K30 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RITA1Q96K30 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RITA1Q96K30 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RITA1Q96K30 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RITA1Q96K30 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RITA1Q96K30 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RITA1Q96K30 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms