Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.98■■□□□ 1.43
TRIM11Q96F44 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM11Q96F44 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM11Q96F44 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.98■■□□□ 1.43
TRIM11Q96F44 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM11Q96F44 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM11Q96F44 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM11Q96F44 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM11Q96F44 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM11Q96F44 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM11Q96F44 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM11Q96F44 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM11Q96F44 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM11Q96F44 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
TRIM11Q96F44 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.97■■□□□ 1.43
TRIM11Q96F44 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.97■■□□□ 1.43
TRIM11Q96F44 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.97■■□□□ 1.43
TRIM11Q96F44 AL031848.2-201ENST00000607670 837 ntBASIC23.97■■□□□ 1.43
TRIM11Q96F44 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM11Q96F44 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM11Q96F44 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM11Q96F44 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.96■■□□□ 1.43
TRIM11Q96F44 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM11Q96F44 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM11Q96F44 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM11Q96F44 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
TRIM11Q96F44 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM11Q96F44 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM11Q96F44 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM11Q96F44 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM11Q96F44 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.96■■□□□ 1.43
TRIM11Q96F44 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM11Q96F44 AC137630.3-201ENST00000607245 391 ntBASIC23.96■■□□□ 1.43
TRIM11Q96F44 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM11Q96F44 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM11Q96F44 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM11Q96F44 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM11Q96F44 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
TRIM11Q96F44 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.95■■□□□ 1.42
TRIM11Q96F44 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.95■■□□□ 1.42
TRIM11Q96F44 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM11Q96F44 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
TRIM11Q96F44 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.95■■□□□ 1.42
TRIM11Q96F44 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM11Q96F44 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM11Q96F44 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM11Q96F44 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.94■■□□□ 1.42
TRIM11Q96F44 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM11Q96F44 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM11Q96F44 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM11Q96F44 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
TRIM11Q96F44 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.94■■□□□ 1.42
TRIM11Q96F44 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM11Q96F44 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.93■■□□□ 1.42
TRIM11Q96F44 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.93■■□□□ 1.42
TRIM11Q96F44 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.93■■□□□ 1.42
TRIM11Q96F44 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM11Q96F44 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM11Q96F44 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM11Q96F44 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.93■■□□□ 1.42
TRIM11Q96F44 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.93■■□□□ 1.42
TRIM11Q96F44 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM11Q96F44 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.93■■□□□ 1.42
TRIM11Q96F44 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.93■■□□□ 1.42
TRIM11Q96F44 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM11Q96F44 SNX5-217ENST00000606557 1087 ntBASIC23.93■■□□□ 1.42
TRIM11Q96F44 AC133561.1-201ENST00000568600 2415 ntBASIC23.93■■□□□ 1.42
TRIM11Q96F44 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM11Q96F44 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM11Q96F44 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM11Q96F44 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.92■■□□□ 1.42
TRIM11Q96F44 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.92■■□□□ 1.42
TRIM11Q96F44 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM11Q96F44 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
TRIM11Q96F44 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM11Q96F44 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM11Q96F44 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.91■■□□□ 1.42
TRIM11Q96F44 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM11Q96F44 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.91■■□□□ 1.42
TRIM11Q96F44 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.91■■□□□ 1.42
TRIM11Q96F44 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM11Q96F44 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM11Q96F44 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM11Q96F44 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
TRIM11Q96F44 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM11Q96F44 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
TRIM11Q96F44 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.89■■□□□ 1.41
TRIM11Q96F44 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.89■■□□□ 1.41
TRIM11Q96F44 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.89■■□□□ 1.41
TRIM11Q96F44 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.89■■□□□ 1.41
TRIM11Q96F44 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM11Q96F44 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM11Q96F44 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.88■■□□□ 1.41
TRIM11Q96F44 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.88■■□□□ 1.41
TRIM11Q96F44 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM11Q96F44 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
TRIM11Q96F44 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
TRIM11Q96F44 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.88■■□□□ 1.41
TRIM11Q96F44 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.88■■□□□ 1.41
TRIM11Q96F44 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms